rs7110424

Homo sapiens
G>T
None
Check p-value
SNV (Single Nucleotide Variation)
G==0204 (6125/29908,GnomAD)
G==0219 (6398/29118,TOPMED)
G==0280 (1404/5008,1000G)
G==0113 (434/3854,ALSPAC)
G==0120 (444/3708,TWINSUK)
chr11:102552935 (GRCh38.p7) (11q22.2)
AD
GWASdb2
1   publication(s)
See rs on genome
43 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.102552935G>T
GRCh37.p13 chr 11NC_000011.9:g.102423666G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.353T=0.647
1000GenomesAmericanSub694G=0.240T=0.760
1000GenomesEast AsianSub1008G=0.403T=0.597
1000GenomesEuropeSub1006G=0.133T=0.867
1000GenomesGlobalStudy-wide5008G=0.280T=0.720
1000GenomesSouth AsianSub978G=0.240T=0.760
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.113T=0.887
The Genome Aggregation DatabaseAfricanSub8684G=0.307T=0.693
The Genome Aggregation DatabaseAmericanSub838G=0.210T=0.790
The Genome Aggregation DatabaseEast AsianSub1616G=0.425T=0.575
The Genome Aggregation DatabaseEuropeSub18472G=0.138T=0.861
The Genome Aggregation DatabaseGlobalStudy-wide29908G=0.204T=0.795
The Genome Aggregation DatabaseOtherSub298G=0.110T=0.890
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.219T=0.780
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.120T=0.880
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs71104240.000862alcohol dependence20201924

eQTL of rs7110424 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7110424 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr11102421851102421950E067-1716
chr11102422090102422206E067-1460
chr11102422286102422336E067-1330
chr11102399214102399806E068-23860
chr11102399910102400075E068-23591
chr11102421851102421950E068-1716
chr11102472204102472411E06848538
chr11102472537102472591E06848871
chr11102473105102473213E06849439
chr11102421851102421950E069-1716
chr11102422090102422206E069-1460
chr11102422286102422336E069-1330
chr11102472204102472411E06948538
chr11102472537102472591E06948871
chr11102473105102473213E06949439
chr11102399214102399806E071-23860
chr11102399910102400075E071-23591
chr11102400149102400201E071-23465
chr11102401019102401066E071-22600
chr11102422090102422206E071-1460
chr11102422286102422336E071-1330
chr11102472537102472591E07148871
chr11102473105102473213E07149439
chr11102399910102400075E072-23591
chr11102401019102401066E072-22600
chr11102421851102421950E072-1716
chr11102422090102422206E072-1460
chr11102422286102422336E072-1330
chr11102473105102473213E07249439
chr11102421851102421950E073-1716
chr11102422090102422206E073-1460
chr11102422286102422336E073-1330
chr11102472537102472591E07348871
chr11102399081102399137E074-24529
chr11102399214102399806E074-23860
chr11102399910102400075E074-23591
chr11102400149102400201E074-23465
chr11102421851102421950E074-1716
chr11102422090102422206E074-1460
chr11102422286102422336E074-1330
chr11102472204102472411E07448538
chr11102472537102472591E07448871
chr11102473105102473213E07449439