rs7114882

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0289 (8670/29960,GnomAD)
C=0246 (7178/29118,TOPMED)
C=0355 (1778/5008,1000G)
C=0254 (980/3854,ALSPAC)
C=0249 (923/3708,TWINSUK)
chr11:42641807 (GRCh38.p7) (11p12)
AD
GWASdb2
1   publication(s)
See rs on genome
38 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.42641807T>C
GRCh37.p13 chr 11NC_000011.9:g.42663357T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.770C=0.230
1000GenomesAmericanSub694T=0.740C=0.260
1000GenomesEast AsianSub1008T=0.307C=0.693
1000GenomesEuropeSub1006T=0.751C=0.249
1000GenomesGlobalStudy-wide5008T=0.645C=0.355
1000GenomesSouth AsianSub978T=0.650C=0.350
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.746C=0.254
The Genome Aggregation DatabaseAfricanSub8718T=0.772C=0.228
The Genome Aggregation DatabaseAmericanSub836T=0.690C=0.310
The Genome Aggregation DatabaseEast AsianSub1618T=0.294C=0.706
The Genome Aggregation DatabaseEuropeSub18486T=0.717C=0.282
The Genome Aggregation DatabaseGlobalStudy-wide29960T=0.710C=0.289
The Genome Aggregation DatabaseOtherSub302T=0.830C=0.170
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.753C=0.246
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.751C=0.249
PMID Title Author Journal
23953852Genome-wide association studies of maximum number of drinks.Pan YJ Psychiatr Res

P-Value

SNP ID p-value Traits Study
rs71148828.17E-05alcohol consumption23953852

eQTL of rs7114882 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7114882 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr114264640542646445E068-16912
chr114264645042646773E068-16584
chr114264683542646897E068-16460
chr114264694642647163E068-16194
chr114261337042613524E070-49833
chr114261359042613664E070-49693
chr114261366542613765E070-49592
chr114261415142614201E070-49156
chr114261337042613524E071-49833
chr114261359042613664E071-49693
chr114261366542613765E071-49592
chr114261415142614201E071-49156
chr114261420442614557E071-48800
chr114261514042615313E071-48044
chr114261542542615536E071-47821
chr114264640542646445E071-16912
chr114264645042646773E071-16584
chr114264683542646897E071-16460
chr114264694642647163E071-16194
chr114264717942647234E071-16123
chr114264731542647799E071-15558
chr114261514042615313E072-48044
chr114261415142614201E074-49156
chr114261420442614557E074-48800
chr114261514042615313E074-48044
chr114264640542646445E074-16912
chr114264645042646773E074-16584
chr114264683542646897E074-16460
chr114264694642647163E074-16194
chr114264717942647234E074-16123
chr114261807042618793E081-44564
chr114261889142618977E081-44380
chr114261976442620250E081-43107
chr114262045542620505E081-42852
chr114261807042618793E082-44564
chr114261889142618977E082-44380
chr114267853242679078E08215175
chr114267919142679381E08215834