| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 11 | NC_000011.10:g.96999233G>A |
| GRCh38.p7 chr 11 | NC_000011.10:g.96999233G>T |
| GRCh37.p13 chr 11 | NC_000011.9:g.96870233G>A |
| GRCh37.p13 chr 11 | NC_000011.9:g.96870233G>T |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.677 | A=0.323 |
| 1000Genomes | American | Sub | 694 | G=0.550 | A=0.450 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.845 | A=0.155 |
| 1000Genomes | Europe | Sub | 1006 | G=0.467 | A=0.533 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.667 | A=0.333 |
| 1000Genomes | South Asian | Sub | 978 | G=0.760 | A=0.240 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.456 | A=0.544 |
| The Genome Aggregation Database | African | Sub | 8674 | G=0.640 | A=0.360 |
| The Genome Aggregation Database | American | Sub | 838 | G=0.560 | A=0.440 |
| The Genome Aggregation Database | East Asian | Sub | 1622 | G=0.870 | A=0.130 |
| The Genome Aggregation Database | Europe | Sub | 18470 | G=0.452 | A=0.548 |
| The Genome Aggregation Database | Global | Study-wide | 29906 | G=0.532 | A=0.467 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.430 | A=0.570 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.451 | A=0.549 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 17158188 | Novel genes identified in a high-density genome wide association study for nicotine dependence. | Bierut LJ | Hum Mol Genet |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs7124287 | 0.000885 | nicotine dependence | 17158188 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr11 | 72631214 | 72631273 | E067 | -46319 |
| chr11 | 72632467 | 72632724 | E067 | -44868 |
| chr11 | 72632871 | 72632955 | E067 | -44637 |
| chr11 | 72633099 | 72633143 | E067 | -44449 |
| chr11 | 72640863 | 72640931 | E067 | -36661 |
| chr11 | 72640950 | 72641101 | E067 | -36491 |
| chr11 | 72650928 | 72651128 | E067 | -26464 |
| chr11 | 72651259 | 72651371 | E067 | -26221 |
| chr11 | 72651497 | 72651852 | E067 | -25740 |
| chr11 | 72700621 | 72700784 | E067 | 23029 |
| chr11 | 72700852 | 72700896 | E067 | 23260 |
| chr11 | 72700901 | 72701032 | E067 | 23309 |
| chr11 | 72707867 | 72707917 | E067 | 30275 |
| chr11 | 72707978 | 72708059 | E067 | 30386 |
| chr11 | 72708060 | 72708320 | E067 | 30468 |
| chr11 | 72723151 | 72723201 | E067 | 45559 |
| chr11 | 72723257 | 72723500 | E067 | 45665 |
| chr11 | 72723658 | 72723846 | E067 | 46066 |
| chr11 | 72723868 | 72723975 | E067 | 46276 |
| chr11 | 72724041 | 72724533 | E067 | 46449 |
| chr11 | 72631214 | 72631273 | E068 | -46319 |
| chr11 | 72631400 | 72631457 | E068 | -46135 |
| chr11 | 72631712 | 72631899 | E068 | -45693 |
| chr11 | 72632030 | 72632099 | E068 | -45493 |
| chr11 | 72632139 | 72632247 | E068 | -45345 |
| chr11 | 72632337 | 72632400 | E068 | -45192 |
| chr11 | 72632467 | 72632724 | E068 | -44868 |
| chr11 | 72635729 | 72636076 | E068 | -41516 |
| chr11 | 72636126 | 72636244 | E068 | -41348 |
| chr11 | 72640863 | 72640931 | E068 | -36661 |
| chr11 | 72640950 | 72641101 | E068 | -36491 |
| chr11 | 72650195 | 72650293 | E068 | -27299 |
| chr11 | 72650928 | 72651128 | E068 | -26464 |
| chr11 | 72651259 | 72651371 | E068 | -26221 |
| chr11 | 72696517 | 72696603 | E068 | 18925 |
| chr11 | 72696650 | 72697127 | E068 | 19058 |
| chr11 | 72699895 | 72700279 | E068 | 22303 |
| chr11 | 72700337 | 72700413 | E068 | 22745 |
| chr11 | 72700536 | 72700580 | E068 | 22944 |
| chr11 | 72700621 | 72700784 | E068 | 23029 |
| chr11 | 72700852 | 72700896 | E068 | 23260 |
| chr11 | 72700901 | 72701032 | E068 | 23309 |
| chr11 | 72707978 | 72708059 | E068 | 30386 |
| chr11 | 72708060 | 72708320 | E068 | 30468 |
| chr11 | 72708353 | 72708425 | E068 | 30761 |
| chr11 | 72724041 | 72724533 | E068 | 46449 |
| chr11 | 72727353 | 72727432 | E068 | 49761 |
| chr11 | 72631214 | 72631273 | E069 | -46319 |
| chr11 | 72631400 | 72631457 | E069 | -46135 |
| chr11 | 72631712 | 72631899 | E069 | -45693 |
| chr11 | 72632030 | 72632099 | E069 | -45493 |
| chr11 | 72632139 | 72632247 | E069 | -45345 |
| chr11 | 72632337 | 72632400 | E069 | -45192 |
| chr11 | 72632467 | 72632724 | E069 | -44868 |
| chr11 | 72632871 | 72632955 | E069 | -44637 |
| chr11 | 72641138 | 72641438 | E069 | -36154 |
| chr11 | 72641490 | 72641540 | E069 | -36052 |
| chr11 | 72651497 | 72651852 | E069 | -25740 |
| chr11 | 72696650 | 72697127 | E069 | 19058 |
| chr11 | 72697164 | 72697214 | E069 | 19572 |
| chr11 | 72699895 | 72700279 | E069 | 22303 |
| chr11 | 72700337 | 72700413 | E069 | 22745 |
| chr11 | 72700536 | 72700580 | E069 | 22944 |
| chr11 | 72700621 | 72700784 | E069 | 23029 |
| chr11 | 72700852 | 72700896 | E069 | 23260 |
| chr11 | 72700901 | 72701032 | E069 | 23309 |
| chr11 | 72707446 | 72707524 | E069 | 29854 |
| chr11 | 72707867 | 72707917 | E069 | 30275 |
| chr11 | 72707978 | 72708059 | E069 | 30386 |
| chr11 | 72708060 | 72708320 | E069 | 30468 |
| chr11 | 72708353 | 72708425 | E069 | 30761 |
| chr11 | 72717690 | 72717740 | E069 | 40098 |
| chr11 | 72724041 | 72724533 | E069 | 46449 |
| chr11 | 72631214 | 72631273 | E071 | -46319 |
| chr11 | 72631400 | 72631457 | E071 | -46135 |
| chr11 | 72631712 | 72631899 | E071 | -45693 |
| chr11 | 72632030 | 72632099 | E071 | -45493 |
| chr11 | 72632139 | 72632247 | E071 | -45345 |
| chr11 | 72632337 | 72632400 | E071 | -45192 |
| chr11 | 72632467 | 72632724 | E071 | -44868 |
| chr11 | 72632871 | 72632955 | E071 | -44637 |
| chr11 | 72637498 | 72637601 | E071 | -39991 |
| chr11 | 72637699 | 72637776 | E071 | -39816 |
| chr11 | 72638162 | 72638218 | E071 | -39374 |
| chr11 | 72638219 | 72638269 | E071 | -39323 |
| chr11 | 72638307 | 72638364 | E071 | -39228 |
| chr11 | 72638406 | 72638478 | E071 | -39114 |
| chr11 | 72638788 | 72639053 | E071 | -38539 |
| chr11 | 72640863 | 72640931 | E071 | -36661 |
| chr11 | 72640950 | 72641101 | E071 | -36491 |
| chr11 | 72641138 | 72641438 | E071 | -36154 |
| chr11 | 72641490 | 72641540 | E071 | -36052 |
| chr11 | 72642906 | 72643020 | E071 | -34572 |
| chr11 | 72643039 | 72643089 | E071 | -34503 |
| chr11 | 72643090 | 72643194 | E071 | -34398 |
| chr11 | 72643256 | 72643665 | E071 | -33927 |
| chr11 | 72645906 | 72646003 | E071 | -31589 |
| chr11 | 72646071 | 72646115 | E071 | -31477 |
| chr11 | 72646223 | 72646369 | E071 | -31223 |
| chr11 | 72646442 | 72646503 | E071 | -31089 |
| chr11 | 72646578 | 72646658 | E071 | -30934 |
| chr11 | 72646712 | 72647134 | E071 | -30458 |
| chr11 | 72647187 | 72647264 | E071 | -30328 |
| chr11 | 72650928 | 72651128 | E071 | -26464 |
| chr11 | 72651259 | 72651371 | E071 | -26221 |
| chr11 | 72661809 | 72662143 | E071 | -15449 |
| chr11 | 72680752 | 72680872 | E071 | 3160 |
| chr11 | 72680874 | 72681334 | E071 | 3282 |
| chr11 | 72685407 | 72685474 | E071 | 7815 |
| chr11 | 72685675 | 72685725 | E071 | 8083 |
| chr11 | 72685728 | 72685847 | E071 | 8136 |
| chr11 | 72692149 | 72692249 | E071 | 14557 |
| chr11 | 72692370 | 72692454 | E071 | 14778 |
| chr11 | 72692881 | 72692941 | E071 | 15289 |
| chr11 | 72693121 | 72693324 | E071 | 15529 |
| chr11 | 72693354 | 72693446 | E071 | 15762 |
| chr11 | 72696650 | 72697127 | E071 | 19058 |
| chr11 | 72697164 | 72697214 | E071 | 19572 |
| chr11 | 72700337 | 72700413 | E071 | 22745 |
| chr11 | 72700536 | 72700580 | E071 | 22944 |
| chr11 | 72700621 | 72700784 | E071 | 23029 |
| chr11 | 72700852 | 72700896 | E071 | 23260 |
| chr11 | 72700901 | 72701032 | E071 | 23309 |
| chr11 | 72708353 | 72708425 | E071 | 30761 |
| chr11 | 72708440 | 72708509 | E071 | 30848 |
| chr11 | 72712799 | 72712960 | E071 | 35207 |
| chr11 | 72712979 | 72713073 | E071 | 35387 |
| chr11 | 72717690 | 72717740 | E071 | 40098 |
| chr11 | 72723868 | 72723975 | E071 | 46276 |
| chr11 | 72724041 | 72724533 | E071 | 46449 |
| chr11 | 72724913 | 72724969 | E071 | 47321 |
| chr11 | 72725425 | 72725469 | E071 | 47833 |
| chr11 | 72727353 | 72727432 | E071 | 49761 |
| chr11 | 72631400 | 72631457 | E072 | -46135 |
| chr11 | 72631712 | 72631899 | E072 | -45693 |
| chr11 | 72632030 | 72632099 | E072 | -45493 |
| chr11 | 72632139 | 72632247 | E072 | -45345 |
| chr11 | 72632337 | 72632400 | E072 | -45192 |
| chr11 | 72632467 | 72632724 | E072 | -44868 |
| chr11 | 72650928 | 72651128 | E072 | -26464 |
| chr11 | 72651259 | 72651371 | E072 | -26221 |
| chr11 | 72674838 | 72674909 | E072 | -2683 |
| chr11 | 72675284 | 72675375 | E072 | -2217 |
| chr11 | 72675437 | 72675489 | E072 | -2103 |
| chr11 | 72693354 | 72693446 | E072 | 15762 |
| chr11 | 72693532 | 72693653 | E072 | 15940 |
| chr11 | 72699895 | 72700279 | E072 | 22303 |
| chr11 | 72700337 | 72700413 | E072 | 22745 |
| chr11 | 72700536 | 72700580 | E072 | 22944 |
| chr11 | 72700621 | 72700784 | E072 | 23029 |
| chr11 | 72700852 | 72700896 | E072 | 23260 |
| chr11 | 72700901 | 72701032 | E072 | 23309 |
| chr11 | 72707867 | 72707917 | E072 | 30275 |
| chr11 | 72707978 | 72708059 | E072 | 30386 |
| chr11 | 72632467 | 72632724 | E073 | -44868 |
| chr11 | 72700337 | 72700413 | E073 | 22745 |
| chr11 | 72700536 | 72700580 | E073 | 22944 |
| chr11 | 72700621 | 72700784 | E073 | 23029 |
| chr11 | 72700852 | 72700896 | E073 | 23260 |
| chr11 | 72700901 | 72701032 | E073 | 23309 |
| chr11 | 72631214 | 72631273 | E074 | -46319 |
| chr11 | 72631400 | 72631457 | E074 | -46135 |
| chr11 | 72631712 | 72631899 | E074 | -45693 |
| chr11 | 72632030 | 72632099 | E074 | -45493 |
| chr11 | 72632139 | 72632247 | E074 | -45345 |
| chr11 | 72632337 | 72632400 | E074 | -45192 |
| chr11 | 72632467 | 72632724 | E074 | -44868 |
| chr11 | 72640863 | 72640931 | E074 | -36661 |
| chr11 | 72640950 | 72641101 | E074 | -36491 |
| chr11 | 72641138 | 72641438 | E074 | -36154 |
| chr11 | 72650928 | 72651128 | E074 | -26464 |
| chr11 | 72651259 | 72651371 | E074 | -26221 |
| chr11 | 72651497 | 72651852 | E074 | -25740 |
| chr11 | 72675437 | 72675489 | E074 | -2103 |
| chr11 | 72696650 | 72697127 | E074 | 19058 |
| chr11 | 72700621 | 72700784 | E074 | 23029 |
| chr11 | 72700852 | 72700896 | E074 | 23260 |
| chr11 | 72700901 | 72701032 | E074 | 23309 |
| chr11 | 72707446 | 72707524 | E074 | 29854 |
| chr11 | 72707867 | 72707917 | E074 | 30275 |
| chr11 | 72707978 | 72708059 | E074 | 30386 |
| chr11 | 72708060 | 72708320 | E074 | 30468 |
| chr11 | 72708353 | 72708425 | E074 | 30761 |
| chr11 | 72723257 | 72723500 | E074 | 45665 |
| chr11 | 72723658 | 72723846 | E074 | 46066 |
| chr11 | 72723868 | 72723975 | E074 | 46276 |
| chr11 | 72724041 | 72724533 | E074 | 46449 |
| chr11 | 72699895 | 72700279 | E081 | 22303 |
| chr11 | 72700337 | 72700413 | E081 | 22745 |
| chr11 | 72700536 | 72700580 | E081 | 22944 |
| chr11 | 72699895 | 72700279 | E082 | 22303 |
| chr11 | 72700337 | 72700413 | E082 | 22745 |
| chr11 | 72700536 | 72700580 | E082 | 22944 |