SNP Detail Info-rs7138291

Sequence Name	Change(s)
GRCh38.p7 chr 12	NC_000012.12:g.94347930T>C
GRCh37.p13 chr 12	NC_000012.11:g.94741706T>C

Molecule type	Change	Amino acid[Codon]	SO Term
CEP83 transcript variant 2	NM_001042399.1:c.	N/A	Intron Variant
CEP83 transcript variant 1	NM_016122.2:c.	N/A	Intron Variant
CEP83 transcript variant X10	XM_006719437.2:c.	N/A	Intron Variant
CEP83 transcript variant X2	XM_011538424.1:c.	N/A	Intron Variant
CEP83 transcript variant X12	XM_011538427.2:c.	N/A	Intron Variant
CEP83 transcript variant X16	XM_011538429.2:c.	N/A	Intron Variant
CEP83 transcript variant X8	XM_017019385.1:c.	N/A	Intron Variant
CEP83 transcript variant X9	XM_017019386.1:c.	N/A	Intron Variant
CEP83 transcript variant X13	XM_017019387.1:c.	N/A	Intron Variant
CEP83 transcript variant X12	XM_017019388.1:c.	N/A	Intron Variant
CEP83 transcript variant X15	XM_017019389.1:c.	N/A	Intron Variant
CEP83 transcript variant X1	XR_001748731.1:n.	N/A	Intron Variant
CEP83 transcript variant X3	XR_001748732.1:n.	N/A	Intron Variant
CEP83 transcript variant X4	XR_001748733.1:n.	N/A	Intron Variant
CEP83 transcript variant X5	XR_001748734.1:n.	N/A	Intron Variant
CEP83 transcript variant X6	XR_001748735.1:n.	N/A	Intron Variant
CEP83 transcript variant X7	XR_001748736.1:n.	N/A	Intron Variant
CEP83 transcript variant X11	XR_001748737.1:n.	N/A	Intron Variant
CEP83 transcript variant X17	XR_001748738.1:n.	N/A	Intron Variant
CEP83 transcript variant X18	XR_001748739.1:n.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	T=0.961	C=0.039
1000Genomes	American	Sub	694	T=0.870	C=0.130
1000Genomes	East Asian	Sub	1008	T=0.941	C=0.059
1000Genomes	Europe	Sub	1006	T=0.883	C=0.117
1000Genomes	Global	Study-wide	5008	T=0.925	C=0.075
1000Genomes	South Asian	Sub	978	T=0.940	C=0.060
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.885	C=0.115
The Genome Aggregation Database	African	Sub	8714	T=0.958	C=0.042
The Genome Aggregation Database	American	Sub	834	T=0.830	C=0.170
The Genome Aggregation Database	East Asian	Sub	1616	T=0.942	C=0.058
The Genome Aggregation Database	Europe	Sub	18408	T=0.891	C=0.108
The Genome Aggregation Database	Global	Study-wide	29872	T=0.912	C=0.088
The Genome Aggregation Database	Other	Sub	300	T=0.870	C=0.130
Trans-Omics for Precision Medicine	Global	Study-wide	29118	T=0.907	C=0.092
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.890	C=0.110

PMID	Title	Author	Journal
19581569	Genome-wide association study of alcohol dependence.	Treutlein J	Arch Gen Psychiatry

SNP ID	p-value	Traits	Study
rs7138291	5.7E-05	alcohol dependence	19581569

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr12	94698030	94698114	E070	-43592
chr12	94698292	94699706	E070	-42000
chr12	94735609	94735690	E070	-6016

rs7138291