rs7141753

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
C==0360 (10788/29930,GnomAD)
C==0351 (10231/29118,TOPMED)
C==0364 (1824/5008,1000G)
C==0368 (1420/3854,ALSPAC)
C==0380 (1410/3708,TWINSUK)
chr14:65179727 (GRCh38.p7) (14q23.3)
AD
GWASdb2
1   publication(s)
See rs on genome
217 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.65179727C>T
GRCh37.p13 chr 14NC_000014.8:g.65646445C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.309T=0.691
1000GenomesAmericanSub694C=0.230T=0.770
1000GenomesEast AsianSub1008C=0.498T=0.502
1000GenomesEuropeSub1006C=0.393T=0.607
1000GenomesGlobalStudy-wide5008C=0.364T=0.636
1000GenomesSouth AsianSub978C=0.370T=0.630
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.368T=0.632
The Genome Aggregation DatabaseAfricanSub8712C=0.325T=0.675
The Genome Aggregation DatabaseAmericanSub838C=0.240T=0.760
The Genome Aggregation DatabaseEast AsianSub1598C=0.496T=0.504
The Genome Aggregation DatabaseEuropeSub18480C=0.372T=0.627
The Genome Aggregation DatabaseGlobalStudy-wide29930C=0.360T=0.639
The Genome Aggregation DatabaseOtherSub302C=0.270T=0.730
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.351T=0.648
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.380T=0.620
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs71417530.000381alcohol dependence21314694

eQTL of rs7141753 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7141753 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr146563495565635005E067-11440
chr146563523765635322E067-11123
chr146563547865635548E067-10897
chr146564049365640612E067-5833
chr146564084565641818E067-4627
chr146564182665641903E067-4542
chr146564198065642070E067-4375
chr146564649265647672E06747
chr146567757565677846E06731130
chr146567809365678464E06731648
chr146567852265678626E06732077
chr146568323665683286E06736791
chr146568329465683362E06736849
chr146568352565683575E06737080
chr146568897365689710E06742528
chr146568983465689921E06743389
chr146569144365691818E06744998
chr146569187865691947E06745433
chr146569195265692111E06745507
chr146569211465692943E06745669
chr146569294765693066E06746502
chr146569309965693179E06746654
chr146569325065694442E06746805
chr146563495565635005E068-11440
chr146563523765635322E068-11123
chr146563547865635548E068-10897
chr146564049365640612E068-5833
chr146564649265647672E06847
chr146566062165660736E06814176
chr146566077065660908E06814325
chr146566091465660989E06814469
chr146566103965661096E06814594
chr146566112565661196E06814680
chr146566186465662154E06815419
chr146567621865676272E06829773
chr146567629465676383E06829849
chr146567675665677535E06830311
chr146567757565677846E06831130
chr146567809365678464E06831648
chr146567852265678626E06832077
chr146568137465681940E06834929
chr146568198465682055E06835539
chr146568323665683286E06836791
chr146568329465683362E06836849
chr146568352565683575E06837080
chr146568389265683942E06837447
chr146568845765688537E06842012
chr146568897365689710E06842528
chr146568983465689921E06843389
chr146569003665690127E06843591
chr146569031265690447E06843867
chr146569144365691818E06844998
chr146569187865691947E06845433
chr146569195265692111E06845507
chr146569211465692943E06845669
chr146569294765693066E06846502
chr146569309965693179E06846654
chr146569325065694442E06846805
chr146563495565635005E069-11440
chr146563523765635322E069-11123
chr146563547865635548E069-10897
chr146564049365640612E069-5833
chr146564198065642070E069-4375
chr146564649265647672E06947
chr146567621865676272E06929773
chr146567629465676383E06929849
chr146567675665677535E06930311
chr146567757565677846E06931130
chr146568323665683286E06936791
chr146568329465683362E06936849
chr146568352565683575E06937080
chr146568389265683942E06937447
chr146568816965688225E06941724
chr146568845765688537E06942012
chr146568897365689710E06942528
chr146568983465689921E06943389
chr146569144365691818E06944998
chr146569187865691947E06945433
chr146569211465692943E06945669
chr146569294765693066E06946502
chr146569309965693179E06946654
chr146564084565641818E070-4627
chr146566062165660736E07014176
chr146566077065660908E07014325
chr146566091465660989E07014469
chr146566103965661096E07014594
chr146566112565661196E07014680
chr146567615165676211E07029706
chr146567621865676272E07029773
chr146567629465676383E07029849
chr146568323665683286E07036791
chr146568329465683362E07036849
chr146568352565683575E07037080
chr146569144365691818E07044998
chr146569187865691947E07045433
chr146569195265692111E07045507
chr146569211465692943E07045669
chr146569294765693066E07046502
chr146569309965693179E07046654
chr146569325065694442E07046805
chr146563335665633406E071-13039
chr146563357665633681E071-12764
chr146563378265634216E071-12229
chr146563489565634935E071-11510
chr146563495565635005E071-11440
chr146563523765635322E071-11123
chr146563547865635548E071-10897
chr146564049365640612E071-5833
chr146564182665641903E071-4542
chr146564198065642070E071-4375
chr146564649265647672E07147
chr146567675665677535E07130311
chr146567757565677846E07131130
chr146567809365678464E07131648
chr146567852265678626E07132077
chr146568352565683575E07137080
chr146568389265683942E07137447
chr146568816965688225E07141724
chr146568897365689710E07142528
chr146568983465689921E07143389
chr146569003665690127E07143591
chr146569031265690447E07143867
chr146569144365691818E07144998
chr146569211465692943E07145669
chr146569294765693066E07146502
chr146569309965693179E07146654
chr146569325065694442E07146805
chr146563061465631768E072-14677
chr146563495565635005E072-11440
chr146563523765635322E072-11123
chr146563547865635548E072-10897
chr146564049365640612E072-5833
chr146564182665641903E072-4542
chr146564198065642070E072-4375
chr146564649265647672E07247
chr146566103965661096E07214594
chr146566112565661196E07214680
chr146566139565661489E07214950
chr146566171465661825E07215269
chr146566186465662154E07215419
chr146567675665677535E07230311
chr146567757565677846E07231130
chr146568323665683286E07236791
chr146568329465683362E07236849
chr146568352565683575E07237080
chr146568897365689710E07242528
chr146568983465689921E07243389
chr146569144365691818E07244998
chr146569187865691947E07245433
chr146569195265692111E07245507
chr146569211465692943E07245669
chr146569294765693066E07246502
chr146569309965693179E07246654
chr146569325065694442E07246805
chr146567675665677535E07330311
chr146567757565677846E07331130
chr146567809365678464E07331648
chr146567852265678626E07332077
chr146568983465689921E07343389
chr146569144365691818E07344998
chr146569187865691947E07345433
chr146569195265692111E07345507
chr146569211465692943E07345669
chr146569294765693066E07346502
chr146569309965693179E07346654
chr146563061465631768E074-14677
chr146563495565635005E074-11440
chr146563523765635322E074-11123
chr146563547865635548E074-10897
chr146563608365636523E074-9922
chr146564649265647672E07447
chr146566103965661096E07414594
chr146566112565661196E07414680
chr146566139565661489E07414950
chr146566245265662511E07416007
chr146567675665677535E07430311
chr146567757565677846E07431130
chr146567809365678464E07431648
chr146567852265678626E07432077
chr146568137465681940E07434929
chr146568198465682055E07435539
chr146568323665683286E07436791
chr146568329465683362E07436849
chr146568352565683575E07437080
chr146568389265683942E07437447
chr146568897365689710E07442528
chr146568983465689921E07443389
chr146569144365691818E07444998
chr146569187865691947E07445433
chr146569195265692111E07445507
chr146569211465692943E07445669
chr146569294765693066E07446502
chr146569309965693179E07446654
chr146569325065694442E07446805
chr146569450765694568E07448062
chr146569472265694824E07448277
chr146560928265609555E081-36890
chr146560976865610409E081-36036
chr146561173665611786E081-34659
chr146561179565611845E081-34600
chr146561203465612263E081-34182
chr146561231265612450E081-33995
chr146561263465612698E081-33747
chr146564049365640612E081-5833
chr146564084565641818E081-4627
chr146569144365691818E08144998
chr146569187865691947E08145433
chr146569195265692111E08145507
chr146561203465612263E082-34182
chr146561231265612450E082-33995
chr146561263465612698E082-33747
chr146561778365617873E082-28572
chr146561789665617961E082-28484
chr146564084565641818E082-4627
chr146569144365691818E08244998
chr146569187865691947E08245433
chr146569195265692111E08245507