Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 14 | NC_000014.9:g.49402182G>A |
GRCh37.p13 chr 14 | NC_000014.8:g.49868900G>A |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.616 | A=0.384 |
1000Genomes | American | Sub | 694 | G=0.670 | A=0.330 |
1000Genomes | East Asian | Sub | 1008 | G=0.627 | A=0.373 |
1000Genomes | Europe | Sub | 1006 | G=0.781 | A=0.219 |
1000Genomes | Global | Study-wide | 5008 | G=0.684 | A=0.316 |
1000Genomes | South Asian | Sub | 978 | G=0.740 | A=0.260 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.768 | A=0.232 |
The Genome Aggregation Database | African | Sub | 8694 | G=0.646 | A=0.354 |
The Genome Aggregation Database | American | Sub | 836 | G=0.640 | A=0.360 |
The Genome Aggregation Database | East Asian | Sub | 1600 | G=0.561 | A=0.439 |
The Genome Aggregation Database | Europe | Sub | 18480 | G=0.780 | A=0.219 |
The Genome Aggregation Database | Global | Study-wide | 29910 | G=0.725 | A=0.274 |
The Genome Aggregation Database | Other | Sub | 300 | G=0.780 | A=0.220 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.712 | A=0.287 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.776 | A=0.224 |
PMID | Title | Author | Journal |
---|---|---|---|
20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs7148751 | 0.000808 | alcohol dependence | 20201924 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr14 | 49914188 | 49914739 | E067 | 45288 |
chr14 | 49914898 | 49914978 | E067 | 45998 |
chr14 | 49913950 | 49914001 | E069 | 45050 |
chr14 | 49914188 | 49914739 | E069 | 45288 |
chr14 | 49893881 | 49894179 | E070 | 24981 |
chr14 | 49913950 | 49914001 | E070 | 45050 |
chr14 | 49914188 | 49914739 | E070 | 45288 |
chr14 | 49914898 | 49914978 | E070 | 45998 |
chr14 | 49915071 | 49915226 | E070 | 46171 |
chr14 | 49913807 | 49913847 | E071 | 44907 |
chr14 | 49913950 | 49914001 | E071 | 45050 |
chr14 | 49914188 | 49914739 | E071 | 45288 |
chr14 | 49913807 | 49913847 | E072 | 44907 |
chr14 | 49913950 | 49914001 | E072 | 45050 |
chr14 | 49914188 | 49914739 | E072 | 45288 |
chr14 | 49913950 | 49914001 | E074 | 45050 |
chr14 | 49914188 | 49914739 | E074 | 45288 |
chr14 | 49914898 | 49914978 | E074 | 45998 |
chr14 | 49893881 | 49894179 | E081 | 24981 |
chr14 | 49904885 | 49905587 | E081 | 35985 |
chr14 | 49905649 | 49905782 | E081 | 36749 |
chr14 | 49918614 | 49918675 | E081 | 49714 |
chr14 | 49893177 | 49893419 | E082 | 24277 |