rs7152826

Homo sapiens
C>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0493 (14744/29906,GnomAD)
A=0419 (12215/29118,TOPMED)
A=0425 (2128/5008,1000G)
C==0381 (1467/3854,ALSPAC)
C==0386 (1431/3708,TWINSUK)
chr14:35393198 (GRCh38.p7) (14q13.2)
AD
GWASdb2
2   publication(s)
See rs on genome
127 Enhancers around
1 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.35393198C>A
GRCh37.p13 chr 14NC_000014.8:g.35862404C>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.802A=0.198
1000GenomesAmericanSub694C=0.560A=0.440
1000GenomesEast AsianSub1008C=0.678A=0.322
1000GenomesEuropeSub1006C=0.384A=0.616
1000GenomesGlobalStudy-wide5008C=0.575A=0.425
1000GenomesSouth AsianSub978C=0.370A=0.630
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.381A=0.619
The Genome Aggregation DatabaseAfricanSub8708C=0.764A=0.236
The Genome Aggregation DatabaseAmericanSub838C=0.560A=0.440
The Genome Aggregation DatabaseEast AsianSub1616C=0.693A=0.307
The Genome Aggregation DatabaseEuropeSub18442C=0.368A=0.631
The Genome Aggregation DatabaseGlobalStudy-wide29906C=0.507A=0.493
The Genome Aggregation DatabaseOtherSub302C=0.410A=0.590
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.580A=0.419
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.386A=0.614
PMID Title Author Journal
19798070Variant in the 3' region of the IkappaBalpha gene associated with insulin resistance in Hispanic Americans: The IRAS Family Study.Miller MRObesity (Silver Spring)
24277619ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.Quillen EEAm J Med Genet B Neuropsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs71528260.000387alcohol dependence24277619

eQTL of rs7152826 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7152826 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr143583427135835739E067-26665
chr143583577635835960E067-26444
chr143583596135836197E067-26207
chr143585312335853347E067-9057
chr143585335235855322E067-7082
chr143587571835876741E06713314
chr143588184835882143E06719444
chr143588214935882967E06719745
chr143583168835832064E068-30340
chr143583211235832727E068-29677
chr143583278035832940E068-29464
chr143583427135835739E068-26665
chr143583577635835960E068-26444
chr143583596135836197E068-26207
chr143583743035837724E068-24680
chr143583829735838433E068-23971
chr143583863635838770E068-23634
chr143583879335838843E068-23561
chr143585335235855322E068-7082
chr143585543635855539E068-6865
chr143586658635867928E0684182
chr143586816035868928E0685756
chr143588184835882143E06819444
chr143581619535816245E069-46159
chr143581632335816495E069-45909
chr143581655235816667E069-45737
chr143581670935817157E069-45247
chr143583211235832727E069-29677
chr143583427135835739E069-26665
chr143583577635835960E069-26444
chr143585335235855322E069-7082
chr143585543635855539E069-6865
chr143585575335856277E069-6127
chr143587537935875423E06912975
chr143588184835882143E06919444
chr143588214935882967E06919745
chr143581655235816667E070-45737
chr143581670935817157E070-45247
chr143585335235855322E070-7082
chr143585543635855539E070-6865
chr143585575335856277E070-6127
chr143589084135890891E07028437
chr143589101435891064E07028610
chr143589110435891154E07028700
chr143589138135891885E07028977
chr143581289235813046E071-49358
chr143581306535813293E071-49111
chr143581340035813695E071-48709
chr143581655235816667E071-45737
chr143581670935817157E071-45247
chr143582099535821128E071-41276
chr143582117435822448E071-39956
chr143583168835832064E071-30340
chr143583211235832727E071-29677
chr143583278035832940E071-29464
chr143583427135835739E071-26665
chr143583577635835960E071-26444
chr143583625635837428E071-24976
chr143583743035837724E071-24680
chr143583774435838247E071-24157
chr143583829735838433E071-23971
chr143585295435853087E071-9317
chr143585312335853347E071-9057
chr143585335235855322E071-7082
chr143585543635855539E071-6865
chr143587544835875662E07113044
chr143587571835876741E07113314
chr143588184835882143E07119444
chr143588214935882967E07119745
chr143581619535816245E072-46159
chr143581632335816495E072-45909
chr143581655235816667E072-45737
chr143581670935817157E072-45247
chr143583168835832064E072-30340
chr143583211235832727E072-29677
chr143583278035832940E072-29464
chr143583427135835739E072-26665
chr143583577635835960E072-26444
chr143583596135836197E072-26207
chr143583625635837428E072-24976
chr143584190235842218E072-20186
chr143585251235852642E072-9762
chr143585275435852892E072-9512
chr143585295435853087E072-9317
chr143585312335853347E072-9057
chr143585335235855322E072-7082
chr143585543635855539E072-6865
chr143587537935875423E07212975
chr143587571835876741E07213314
chr143588184835882143E07219444
chr143583168835832064E073-30340
chr143583211235832727E073-29677
chr143583427135835739E073-26665
chr143583577635835960E073-26444
chr143583596135836197E073-26207
chr143585295435853087E073-9317
chr143585312335853347E073-9057
chr143585335235855322E073-7082
chr143585543635855539E073-6865
chr143587537935875423E07312975
chr143587544835875662E07313044
chr143587571835876741E07313314
chr143588214935882967E07319745
chr143581340035813695E074-48709
chr143581370035813882E074-48522
chr143581670935817157E074-45247
chr143581717435817611E074-44793
chr143583168835832064E074-30340
chr143583427135835739E074-26665
chr143583577635835960E074-26444
chr143583596135836197E074-26207
chr143583625635837428E074-24976
chr143583743035837724E074-24680
chr143585312335853347E074-9057
chr143585335235855322E074-7082
chr143585543635855539E074-6865
chr143585575335856277E074-6127
chr143585629835856436E074-5968
chr143587537935875423E07412975
chr143588184835882143E07419444
chr143588214935882967E07419745
chr143585335235855322E081-7082
chr143587537935875423E08112975
chr143587544835875662E08113044
chr143589138135891885E08128977
chr143585543635855539E082-6865
chr143585575335856277E082-6127










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr143586915235875351E0676748