rs7153633

Homo sapiens
T>A / T>C
None
Check p-value
SNV (Single Nucleotide Variation)
A=0271 (8095/29872,GnomAD)
A=0262 (7644/29118,TOPMED)
A=0323 (1616/5008,1000G)
A=0283 (1092/3854,ALSPAC)
A=0285 (1058/3708,TWINSUK)
chr14:41321464 (GRCh38.p7) (14q21.1)
ND
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.41321464T>A
GRCh38.p7 chr 14NC_000014.9:g.41321464T>C
GRCh37.p13 chr 14NC_000014.8:g.41790667T>A
GRCh37.p13 chr 14NC_000014.8:g.41790667T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.793A=0.207
1000GenomesAmericanSub694T=0.710A=0.290
1000GenomesEast AsianSub1008T=0.551A=0.449
1000GenomesEuropeSub1006T=0.735A=0.265
1000GenomesGlobalStudy-wide5008T=0.677A=0.323
1000GenomesSouth AsianSub978T=0.570A=0.430
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.717A=0.283
The Genome Aggregation DatabaseAfricanSub8722T=0.753C=0.000
The Genome Aggregation DatabaseAmericanSub834T=0.730C=0.00,
The Genome Aggregation DatabaseEast AsianSub1592T=0.566C=0.000
The Genome Aggregation DatabaseEuropeSub18424T=0.731C=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29872T=0.729C=0.000
The Genome Aggregation DatabaseOtherSub300T=0.750C=0.00,
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.737A=0.262
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.715A=0.285
PMID Title Author Journal
17158188Novel genes identified in a high-density genome wide association study for nicotine dependence.Bierut LJHum Mol Genet

P-Value

SNP ID p-value Traits Study
rs71536330.000755nicotine dependence17158188

eQTL of rs7153633 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7153633 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.