SNP Detail Info-rs7159831

Molecule type	Change	Amino acid[Codon]	SO Term
GPHN transcript variant 2	NM_001024218.1:c.	N/A	Intron Variant
GPHN transcript variant 1	NM_020806.4:c.	N/A	Intron Variant
GPHN transcript variant X14	XM_005267254.3:c.	N/A	Intron Variant
GPHN transcript variant X1	XM_011536340.2:c.	N/A	Intron Variant
GPHN transcript variant X3	XM_011536342.2:c.	N/A	Intron Variant
GPHN transcript variant X5	XM_011536343.2:c.	N/A	Intron Variant
GPHN transcript variant X6	XM_011536344.2:c.	N/A	Intron Variant
GPHN transcript variant X8	XM_011536345.2:c.	N/A	Intron Variant
GPHN transcript variant X9	XM_011536346.2:c.	N/A	Intron Variant
GPHN transcript variant X15	XM_011536347.2:c.	N/A	Intron Variant
GPHN transcript variant X2	XM_017020913.1:c.	N/A	Intron Variant
GPHN transcript variant X4	XM_017020914.1:c.	N/A	Intron Variant
GPHN transcript variant X7	XM_017020915.1:c.	N/A	Intron Variant
GPHN transcript variant X10	XM_017020916.1:c.	N/A	Intron Variant
GPHN transcript variant X11	XM_017020917.1:c.	N/A	Intron Variant
GPHN transcript variant X12	XM_017020918.1:c.	N/A	Intron Variant
GPHN transcript variant X13	XM_017020919.1:c.	N/A	Intron Variant
GPHN transcript variant X16	XM_017020920.1:c.	N/A	Intron Variant
GPHN transcript variant X17	XM_017020921.1:c.	N/A	Intron Variant
GPHN transcript variant X18	XM_017020922.1:c.	N/A	Intron Variant
GPHN transcript variant X19	XM_017020923.1:c.	N/A	Intron Variant
GPHN transcript variant X20	XM_017020924.1:c.	N/A	Intron Variant
GPHN transcript variant X21	XM_017020925.1:c.	N/A	Intron Variant
GPHN transcript variant X22	XM_017020926.1:c.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.997	A=0.003
1000Genomes	American	Sub	694	G=0.960	A=0.040
1000Genomes	East Asian	Sub	1008	G=0.999	A=0.001
1000Genomes	Europe	Sub	1006	G=0.906	A=0.094
1000Genomes	Global	Study-wide	5008	G=0.972	A=0.028
1000Genomes	South Asian	Sub	978	G=0.990	A=0.010
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.885	A=0.115
The Genome Aggregation Database	African	Sub	8732	G=0.980	A=0.020
The Genome Aggregation Database	American	Sub	836	G=0.950	A=0.050
The Genome Aggregation Database	East Asian	Sub	1612	G=1.000	A=0.000
The Genome Aggregation Database	Europe	Sub	18474	G=0.875	A=0.124
The Genome Aggregation Database	Global	Study-wide	29956	G=0.915	A=0.084
The Genome Aggregation Database	Other	Sub	302	G=0.960	A=0.040
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.939	A=0.060
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.883	A=0.117

PMID	Title	Author	Journal
20201924	Genome-wide association study of alcohol dependence implicates a region on chromosome 11.	Edenberg HJ	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs7159831	0.00089	alcohol dependence	20201924

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr14	67031650	67031700	E067	2617
chr14	67006813	67006872	E068	-22161
chr14	67006919	67007069	E068	-21964
chr14	67005889	67005948	E069	-23085
chr14	67005986	67006043	E069	-22990
chr14	67006813	67006872	E069	-22161
chr14	67006919	67007069	E069	-21964
chr14	67005889	67005948	E071	-23085
chr14	67005986	67006043	E071	-22990
chr14	67006813	67006872	E071	-22161
chr14	67006919	67007069	E071	-21964
chr14	67008524	67008578	E071	-20455
chr14	67073705	67073959	E071	44672
chr14	67074192	67074272	E071	45159
chr14	67005889	67005948	E072	-23085
chr14	67005986	67006043	E072	-22990
chr14	67006813	67006872	E072	-22161
chr14	67006919	67007069	E072	-21964
chr14	67006813	67006872	E073	-22161
chr14	67006919	67007069	E073	-21964
chr14	67005889	67005948	E074	-23085
chr14	67005986	67006043	E074	-22990
chr14	67006813	67006872	E074	-22161
chr14	67006919	67007069	E074	-21964
chr14	67008524	67008578	E074	-20455

rs7159831