rs7175167

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0187 (5594/29908,GnomAD)
T=0220 (6410/29118,TOPMED)
T=0187 (934/5008,1000G)
T=0147 (565/3854,ALSPAC)
T=0153 (566/3708,TWINSUK)
chr15:70233320 (GRCh38.p7) (15q23)
AD
GWASdb2
1   publication(s)
See rs on genome
203 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 15NC_000015.10:g.70233320C>T
GRCh37.p13 chr 15NC_000015.9:g.70525659C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.687T=0.313
1000GenomesAmericanSub694C=0.840T=0.160
1000GenomesEast AsianSub1008C=0.864T=0.136
1000GenomesEuropeSub1006C=0.820T=0.180
1000GenomesGlobalStudy-wide5008C=0.813T=0.187
1000GenomesSouth AsianSub978C=0.910T=0.090
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.853T=0.147
The Genome Aggregation DatabaseAfricanSub8682C=0.719T=0.281
The Genome Aggregation DatabaseAmericanSub838C=0.830T=0.170
The Genome Aggregation DatabaseEast AsianSub1618C=0.838T=0.162
The Genome Aggregation DatabaseEuropeSub18470C=0.854T=0.145
The Genome Aggregation DatabaseGlobalStudy-wide29908C=0.813T=0.187
The Genome Aggregation DatabaseOtherSub300C=0.790T=0.210
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.779T=0.220
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.847T=0.153
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs71751670.00031alcohol dependence20201924

eQTL of rs7175167 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7175167 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr157048742670489875E067-35784
chr157055070570551997E06725046
chr157056215570563488E06736496
chr157056355670564605E06737897
chr157055070570551997E06825046
chr157055580370555942E06830144
chr157055602070556144E06830361
chr157055619470557134E06830535
chr157055975970560627E06834100
chr157056065570560793E06834996
chr157056081570561366E06835156
chr157056143870561575E06835779
chr157056163070562113E06835971
chr157056215570563488E06836496
chr157056355670564605E06837897
chr157056215570563488E06936496
chr157056355670564605E06937897
chr157048220170482415E070-43244
chr157048248870482810E070-42849
chr157048288970482996E070-42663
chr157048329370483702E070-41957
chr157048742670489875E070-35784
chr157048991370491066E070-34593
chr157049115970491213E070-34446
chr157049122270491568E070-34091
chr157049157770491679E070-33980
chr157049176270492539E070-33120
chr157049257170493823E070-31836
chr157049383370493988E070-31671
chr157049411570494198E070-31461
chr157049452570494579E070-31080
chr157049474270494816E070-30843
chr157049497170495139E070-30520
chr157049516070495210E070-30449
chr157049523070495352E070-30307
chr157049578170495884E070-29775
chr157050501670505091E070-20568
chr157050518070505562E070-20097
chr157050579170505841E070-19818
chr157050887170508921E070-16738
chr157050940470509594E070-16065
chr157051114670511266E070-14393
chr157051131570511444E070-14215
chr157051159470511913E070-13746
chr157051204270512126E070-13533
chr157051230670512385E070-13274
chr157051240470512464E070-13195
chr157051311070513418E070-12241
chr157051773670518033E070-7626
chr157051871070518890E070-6769
chr157051892770518977E070-6682
chr157051905970519124E070-6535
chr157051913270519182E070-6477
chr157054455470545243E07018895
chr157054532570545375E07019666
chr157055070570551997E07025046
chr157055200570552399E07026346
chr157055241970552727E07026760
chr157055274770552962E07027088
chr157055420370554253E07028544
chr157055435970554419E07028700
chr157055452370554638E07028864
chr157055466670554720E07029007
chr157055490870555047E07029249
chr157055511470555665E07029455
chr157055580370555942E07030144
chr157055602070556144E07030361
chr157055619470557134E07030535
chr157055713670557482E07031477
chr157055750770557601E07031848
chr157055763370557700E07031974
chr157055780570557990E07032146
chr157055800070558200E07032341
chr157055821970558317E07032560
chr157055839570558728E07032736
chr157055872970559617E07033070
chr157056143870561575E07035779
chr157056163070562113E07035971
chr157056215570563488E07036496
chr157056682370566897E07041164
chr157056694970567118E07041290
chr157048742670489875E071-35784
chr157054987670550686E07124217
chr157055070570551997E07125046
chr157055200570552399E07126346
chr157055511470555665E07129455
chr157055580370555942E07130144
chr157055602070556144E07130361
chr157055619470557134E07130535
chr157055713670557482E07131477
chr157055750770557601E07131848
chr157055763370557700E07131974
chr157055780570557990E07132146
chr157055800070558200E07132341
chr157055821970558317E07132560
chr157055839570558728E07132736
chr157055872970559617E07133070
chr157055975970560627E07134100
chr157056065570560793E07134996
chr157056081570561366E07135156
chr157056143870561575E07135779
chr157056163070562113E07135971
chr157056215570563488E07136496
chr157056355670564605E07137897
chr157057401070574827E07148351
chr157048742670489875E072-35784
chr157055070570551997E07225046
chr157055800070558200E07232341
chr157055821970558317E07232560
chr157055839570558728E07232736
chr157055872970559617E07233070
chr157056355670564605E07237897
chr157048742670489875E073-35784
chr157055602070556144E07330361
chr157055872970559617E07333070
chr157056143870561575E07335779
chr157056163070562113E07335971
chr157056215570563488E07336496
chr157056355670564605E07337897
chr157048742670489875E074-35784
chr157055070570551997E07425046
chr157055200570552399E07426346
chr157055750770557601E07431848
chr157055763370557700E07431974
chr157055780570557990E07432146
chr157055800070558200E07432341
chr157055821970558317E07432560
chr157055839570558728E07432736
chr157055872970559617E07433070
chr157056163070562113E07435971
chr157056215570563488E07436496
chr157056355670564605E07437897
chr157048742670489875E081-35784
chr157048991370491066E081-34593
chr157049115970491213E081-34446
chr157049122270491568E081-34091
chr157049157770491679E081-33980
chr157049176270492539E081-33120
chr157049257170493823E081-31836
chr157049383370493988E081-31671
chr157049411570494198E081-31461
chr157049452570494579E081-31080
chr157049474270494816E081-30843
chr157049497170495139E081-30520
chr157049516070495210E081-30449
chr157049523070495352E081-30307
chr157049821870498274E081-27385
chr157049873170498803E081-26856
chr157049885970498933E081-26726
chr157049915270499313E081-26346
chr157050501670505091E081-20568
chr157050518070505562E081-20097
chr157054371870543935E08118059
chr157054393870544187E08118279
chr157054428170544478E08118622
chr157054455470545243E08118895
chr157054532570545375E08119666
chr157054545970545540E08119800
chr157054566470545769E08120005
chr157054606570546218E08120406
chr157054642270546538E08120763
chr157054661570547096E08120956
chr157054710170547212E08121442
chr157055070570551997E08125046
chr157055200570552399E08126346
chr157055602070556144E08130361
chr157055619470557134E08130535
chr157055872970559617E08133070
chr157056081570561366E08135156
chr157056143870561575E08135779
chr157056163070562113E08135971
chr157056215570563488E08136496
chr157048288970482996E082-42663
chr157048329370483702E082-41957
chr157049115970491213E082-34446
chr157049122270491568E082-34091
chr157049157770491679E082-33980
chr157049176270492539E082-33120
chr157049411570494198E082-31461
chr157049452570494579E082-31080
chr157049474270494816E082-30843
chr157049497170495139E082-30520
chr157049516070495210E082-30449
chr157050579170505841E082-19818
chr157051131570511444E082-14215
chr157051159470511913E082-13746
chr157054371870543935E08218059
chr157054393870544187E08218279
chr157054428170544478E08218622
chr157054455470545243E08218895
chr157054532570545375E08219666
chr157054545970545540E08219800
chr157055070570551997E08225046
chr157055200570552399E08226346
chr157055490870555047E08229249
chr157055511470555665E08229455
chr157055580370555942E08230144
chr157055602070556144E08230361
chr157055821970558317E08232560
chr157056081570561366E08235156
chr157056143870561575E08235779
chr157056163070562113E08235971
chr157056215570563488E08236496