| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 20 | NC_000020.11:g.57630973G>A |
| GRCh37.p13 chr 20 | NC_000020.10:g.56206029G>A |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.489 | A=0.511 |
| 1000Genomes | American | Sub | 694 | G=0.210 | A=0.790 |
| 1000Genomes | East Asian | Sub | 1008 | G=0.016 | A=0.984 |
| 1000Genomes | Europe | Sub | 1006 | G=0.300 | A=0.700 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.245 | A=0.755 |
| 1000Genomes | South Asian | Sub | 978 | G=0.120 | A=0.880 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.262 | A=0.738 |
| The Genome Aggregation Database | African | Sub | 8688 | G=0.461 | A=0.539 |
| The Genome Aggregation Database | American | Sub | 838 | G=0.150 | A=0.850 |
| The Genome Aggregation Database | East Asian | Sub | 1618 | G=0.015 | A=0.985 |
| The Genome Aggregation Database | Europe | Sub | 18464 | G=0.281 | A=0.718 |
| The Genome Aggregation Database | Global | Study-wide | 29910 | G=0.315 | A=0.684 |
| The Genome Aggregation Database | Other | Sub | 302 | G=0.260 | A=0.740 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.332 | A=0.667 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.280 | A=0.720 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 17158188 | Novel genes identified in a high-density genome wide association study for nicotine dependence. | Bierut LJ | Hum Mol Genet |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs718307 | 0.000961 | nicotine dependence | 17158188 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr20 | 56156693 | 56156810 | E067 | -49219 |
| chr20 | 56156878 | 56157063 | E067 | -48966 |
| chr20 | 56157069 | 56157263 | E067 | -48766 |
| chr20 | 56157270 | 56157320 | E067 | -48709 |
| chr20 | 56157396 | 56158502 | E067 | -47527 |
| chr20 | 56235796 | 56236038 | E067 | 29767 |
| chr20 | 56236850 | 56237049 | E067 | 30821 |
| chr20 | 56237140 | 56237724 | E067 | 31111 |
| chr20 | 56237749 | 56237873 | E067 | 31720 |
| chr20 | 56237876 | 56237966 | E067 | 31847 |
| chr20 | 56238170 | 56238220 | E067 | 32141 |
| chr20 | 56238325 | 56238375 | E067 | 32296 |
| chr20 | 56247790 | 56247907 | E067 | 41761 |
| chr20 | 56247953 | 56248057 | E067 | 41924 |
| chr20 | 56156030 | 56156141 | E068 | -49888 |
| chr20 | 56156173 | 56156223 | E068 | -49806 |
| chr20 | 56156400 | 56156501 | E068 | -49528 |
| chr20 | 56156511 | 56156616 | E068 | -49413 |
| chr20 | 56156693 | 56156810 | E068 | -49219 |
| chr20 | 56156878 | 56157063 | E068 | -48966 |
| chr20 | 56157069 | 56157263 | E068 | -48766 |
| chr20 | 56157396 | 56158502 | E068 | -47527 |
| chr20 | 56158656 | 56158853 | E068 | -47176 |
| chr20 | 56161284 | 56161350 | E068 | -44679 |
| chr20 | 56187641 | 56187691 | E068 | -18338 |
| chr20 | 56232350 | 56233237 | E068 | 26321 |
| chr20 | 56233567 | 56233663 | E068 | 27538 |
| chr20 | 56233711 | 56233842 | E068 | 27682 |
| chr20 | 56233963 | 56234132 | E068 | 27934 |
| chr20 | 56234142 | 56234247 | E068 | 28113 |
| chr20 | 56234304 | 56234374 | E068 | 28275 |
| chr20 | 56234394 | 56234591 | E068 | 28365 |
| chr20 | 56236214 | 56236693 | E068 | 30185 |
| chr20 | 56236850 | 56237049 | E068 | 30821 |
| chr20 | 56237140 | 56237724 | E068 | 31111 |
| chr20 | 56237749 | 56237873 | E068 | 31720 |
| chr20 | 56237876 | 56237966 | E068 | 31847 |
| chr20 | 56238170 | 56238220 | E068 | 32141 |
| chr20 | 56238325 | 56238375 | E068 | 32296 |
| chr20 | 56243081 | 56243337 | E068 | 37052 |
| chr20 | 56243348 | 56243432 | E068 | 37319 |
| chr20 | 56243452 | 56243719 | E068 | 37423 |
| chr20 | 56243766 | 56243826 | E068 | 37737 |
| chr20 | 56246787 | 56247746 | E068 | 40758 |
| chr20 | 56247790 | 56247907 | E068 | 41761 |
| chr20 | 56247953 | 56248057 | E068 | 41924 |
| chr20 | 56248366 | 56248455 | E068 | 42337 |
| chr20 | 56248559 | 56248639 | E068 | 42530 |
| chr20 | 56248737 | 56248924 | E068 | 42708 |
| chr20 | 56249105 | 56249195 | E068 | 43076 |
| chr20 | 56249346 | 56249396 | E068 | 43317 |
| chr20 | 56250478 | 56250518 | E068 | 44449 |
| chr20 | 56251207 | 56251263 | E068 | 45178 |
| chr20 | 56251342 | 56251480 | E068 | 45313 |
| chr20 | 56251485 | 56251616 | E068 | 45456 |
| chr20 | 56251667 | 56251975 | E068 | 45638 |
| chr20 | 56252140 | 56252275 | E068 | 46111 |
| chr20 | 56252281 | 56252722 | E068 | 46252 |
| chr20 | 56252915 | 56252965 | E068 | 46886 |
| chr20 | 56253175 | 56253225 | E068 | 47146 |
| chr20 | 56253244 | 56253333 | E068 | 47215 |
| chr20 | 56253453 | 56253984 | E068 | 47424 |
| chr20 | 56156693 | 56156810 | E069 | -49219 |
| chr20 | 56156878 | 56157063 | E069 | -48966 |
| chr20 | 56157069 | 56157263 | E069 | -48766 |
| chr20 | 56157270 | 56157320 | E069 | -48709 |
| chr20 | 56157396 | 56158502 | E069 | -47527 |
| chr20 | 56187151 | 56187221 | E069 | -18808 |
| chr20 | 56187222 | 56187313 | E069 | -18716 |
| chr20 | 56187514 | 56187637 | E069 | -18392 |
| chr20 | 56187641 | 56187691 | E069 | -18338 |
| chr20 | 56233567 | 56233663 | E069 | 27538 |
| chr20 | 56236214 | 56236693 | E069 | 30185 |
| chr20 | 56236850 | 56237049 | E069 | 30821 |
| chr20 | 56237140 | 56237724 | E069 | 31111 |
| chr20 | 56237749 | 56237873 | E069 | 31720 |
| chr20 | 56237876 | 56237966 | E069 | 31847 |
| chr20 | 56238170 | 56238220 | E069 | 32141 |
| chr20 | 56238325 | 56238375 | E069 | 32296 |
| chr20 | 56246787 | 56247746 | E069 | 40758 |
| chr20 | 56253453 | 56253984 | E069 | 47424 |
| chr20 | 56157396 | 56158502 | E070 | -47527 |
| chr20 | 56234690 | 56234763 | E070 | 28661 |
| chr20 | 56235088 | 56235150 | E070 | 29059 |
| chr20 | 56235796 | 56236038 | E070 | 29767 |
| chr20 | 56236214 | 56236693 | E070 | 30185 |
| chr20 | 56236850 | 56237049 | E070 | 30821 |
| chr20 | 56237140 | 56237724 | E070 | 31111 |
| chr20 | 56237749 | 56237873 | E070 | 31720 |
| chr20 | 56237876 | 56237966 | E070 | 31847 |
| chr20 | 56238170 | 56238220 | E070 | 32141 |
| chr20 | 56238325 | 56238375 | E070 | 32296 |
| chr20 | 56238587 | 56238648 | E070 | 32558 |
| chr20 | 56241304 | 56241415 | E070 | 35275 |
| chr20 | 56241431 | 56241481 | E070 | 35402 |
| chr20 | 56241616 | 56241678 | E070 | 35587 |
| chr20 | 56241794 | 56241866 | E070 | 35765 |
| chr20 | 56241870 | 56241914 | E070 | 35841 |
| chr20 | 56242048 | 56242197 | E070 | 36019 |
| chr20 | 56242198 | 56242272 | E070 | 36169 |
| chr20 | 56242317 | 56242414 | E070 | 36288 |
| chr20 | 56242579 | 56242824 | E070 | 36550 |
| chr20 | 56243081 | 56243337 | E070 | 37052 |
| chr20 | 56243348 | 56243432 | E070 | 37319 |
| chr20 | 56243452 | 56243719 | E070 | 37423 |
| chr20 | 56243766 | 56243826 | E070 | 37737 |
| chr20 | 56244935 | 56245055 | E070 | 38906 |
| chr20 | 56245353 | 56245476 | E070 | 39324 |
| chr20 | 56245525 | 56245605 | E070 | 39496 |
| chr20 | 56245656 | 56245738 | E070 | 39627 |
| chr20 | 56245874 | 56245924 | E070 | 39845 |
| chr20 | 56245993 | 56246068 | E070 | 39964 |
| chr20 | 56248366 | 56248455 | E070 | 42337 |
| chr20 | 56248559 | 56248639 | E070 | 42530 |
| chr20 | 56248737 | 56248924 | E070 | 42708 |
| chr20 | 56249105 | 56249195 | E070 | 43076 |
| chr20 | 56249346 | 56249396 | E070 | 43317 |
| chr20 | 56249600 | 56249650 | E070 | 43571 |
| chr20 | 56249795 | 56249889 | E070 | 43766 |
| chr20 | 56252140 | 56252275 | E070 | 46111 |
| chr20 | 56252281 | 56252722 | E070 | 46252 |
| chr20 | 56253244 | 56253333 | E070 | 47215 |
| chr20 | 56253453 | 56253984 | E070 | 47424 |
| chr20 | 56156693 | 56156810 | E071 | -49219 |
| chr20 | 56156878 | 56157063 | E071 | -48966 |
| chr20 | 56157069 | 56157263 | E071 | -48766 |
| chr20 | 56157270 | 56157320 | E071 | -48709 |
| chr20 | 56157396 | 56158502 | E071 | -47527 |
| chr20 | 56158656 | 56158853 | E071 | -47176 |
| chr20 | 56158991 | 56159067 | E071 | -46962 |
| chr20 | 56186558 | 56186713 | E071 | -19316 |
| chr20 | 56186715 | 56186765 | E071 | -19264 |
| chr20 | 56186782 | 56186873 | E071 | -19156 |
| chr20 | 56187151 | 56187221 | E071 | -18808 |
| chr20 | 56202667 | 56202811 | E071 | -3218 |
| chr20 | 56235796 | 56236038 | E071 | 29767 |
| chr20 | 56236214 | 56236693 | E071 | 30185 |
| chr20 | 56236850 | 56237049 | E071 | 30821 |
| chr20 | 56237140 | 56237724 | E071 | 31111 |
| chr20 | 56237749 | 56237873 | E071 | 31720 |
| chr20 | 56237876 | 56237966 | E071 | 31847 |
| chr20 | 56238170 | 56238220 | E071 | 32141 |
| chr20 | 56238325 | 56238375 | E071 | 32296 |
| chr20 | 56238587 | 56238648 | E071 | 32558 |
| chr20 | 56247790 | 56247907 | E071 | 41761 |
| chr20 | 56247953 | 56248057 | E071 | 41924 |
| chr20 | 56250478 | 56250518 | E071 | 44449 |
| chr20 | 56250596 | 56250729 | E071 | 44567 |
| chr20 | 56250890 | 56251051 | E071 | 44861 |
| chr20 | 56251207 | 56251263 | E071 | 45178 |
| chr20 | 56251342 | 56251480 | E071 | 45313 |
| chr20 | 56251485 | 56251616 | E071 | 45456 |
| chr20 | 56251667 | 56251975 | E071 | 45638 |
| chr20 | 56252140 | 56252275 | E071 | 46111 |
| chr20 | 56252281 | 56252722 | E071 | 46252 |
| chr20 | 56252915 | 56252965 | E071 | 46886 |
| chr20 | 56253175 | 56253225 | E071 | 47146 |
| chr20 | 56253244 | 56253333 | E071 | 47215 |
| chr20 | 56253453 | 56253984 | E071 | 47424 |
| chr20 | 56254030 | 56254161 | E071 | 48001 |
| chr20 | 56254234 | 56254594 | E071 | 48205 |
| chr20 | 56156511 | 56156616 | E072 | -49413 |
| chr20 | 56156693 | 56156810 | E072 | -49219 |
| chr20 | 56156878 | 56157063 | E072 | -48966 |
| chr20 | 56157069 | 56157263 | E072 | -48766 |
| chr20 | 56157270 | 56157320 | E072 | -48709 |
| chr20 | 56157396 | 56158502 | E072 | -47527 |
| chr20 | 56158656 | 56158853 | E072 | -47176 |
| chr20 | 56158991 | 56159067 | E072 | -46962 |
| chr20 | 56187151 | 56187221 | E072 | -18808 |
| chr20 | 56187222 | 56187313 | E072 | -18716 |
| chr20 | 56187514 | 56187637 | E072 | -18392 |
| chr20 | 56187641 | 56187691 | E072 | -18338 |
| chr20 | 56235796 | 56236038 | E072 | 29767 |
| chr20 | 56236850 | 56237049 | E072 | 30821 |
| chr20 | 56237140 | 56237724 | E072 | 31111 |
| chr20 | 56237749 | 56237873 | E072 | 31720 |
| chr20 | 56237876 | 56237966 | E072 | 31847 |
| chr20 | 56238170 | 56238220 | E072 | 32141 |
| chr20 | 56246787 | 56247746 | E072 | 40758 |
| chr20 | 56247790 | 56247907 | E072 | 41761 |
| chr20 | 56247953 | 56248057 | E072 | 41924 |
| chr20 | 56248366 | 56248455 | E072 | 42337 |
| chr20 | 56248559 | 56248639 | E072 | 42530 |
| chr20 | 56253453 | 56253984 | E072 | 47424 |
| chr20 | 56156173 | 56156223 | E073 | -49806 |
| chr20 | 56156400 | 56156501 | E073 | -49528 |
| chr20 | 56156511 | 56156616 | E073 | -49413 |
| chr20 | 56156693 | 56156810 | E073 | -49219 |
| chr20 | 56156878 | 56157063 | E073 | -48966 |
| chr20 | 56157069 | 56157263 | E073 | -48766 |
| chr20 | 56157270 | 56157320 | E073 | -48709 |
| chr20 | 56157396 | 56158502 | E073 | -47527 |
| chr20 | 56158656 | 56158853 | E073 | -47176 |
| chr20 | 56158991 | 56159067 | E073 | -46962 |
| chr20 | 56235796 | 56236038 | E073 | 29767 |
| chr20 | 56236214 | 56236693 | E073 | 30185 |
| chr20 | 56236850 | 56237049 | E073 | 30821 |
| chr20 | 56237140 | 56237724 | E073 | 31111 |
| chr20 | 56247790 | 56247907 | E073 | 41761 |
| chr20 | 56247953 | 56248057 | E073 | 41924 |
| chr20 | 56249600 | 56249650 | E073 | 43571 |
| chr20 | 56251667 | 56251975 | E073 | 45638 |
| chr20 | 56252140 | 56252275 | E073 | 46111 |
| chr20 | 56156878 | 56157063 | E074 | -48966 |
| chr20 | 56157069 | 56157263 | E074 | -48766 |
| chr20 | 56157270 | 56157320 | E074 | -48709 |
| chr20 | 56157396 | 56158502 | E074 | -47527 |
| chr20 | 56158656 | 56158853 | E074 | -47176 |
| chr20 | 56158991 | 56159067 | E074 | -46962 |
| chr20 | 56186782 | 56186873 | E074 | -19156 |
| chr20 | 56187151 | 56187221 | E074 | -18808 |
| chr20 | 56187222 | 56187313 | E074 | -18716 |
| chr20 | 56187514 | 56187637 | E074 | -18392 |
| chr20 | 56187641 | 56187691 | E074 | -18338 |
| chr20 | 56202667 | 56202811 | E074 | -3218 |
| chr20 | 56235796 | 56236038 | E074 | 29767 |
| chr20 | 56236214 | 56236693 | E074 | 30185 |
| chr20 | 56236850 | 56237049 | E074 | 30821 |
| chr20 | 56237140 | 56237724 | E074 | 31111 |
| chr20 | 56237749 | 56237873 | E074 | 31720 |
| chr20 | 56237876 | 56237966 | E074 | 31847 |
| chr20 | 56238170 | 56238220 | E074 | 32141 |
| chr20 | 56238325 | 56238375 | E074 | 32296 |
| chr20 | 56238587 | 56238648 | E074 | 32558 |
| chr20 | 56239005 | 56239076 | E074 | 32976 |
| chr20 | 56243081 | 56243337 | E074 | 37052 |
| chr20 | 56243348 | 56243432 | E074 | 37319 |
| chr20 | 56246787 | 56247746 | E074 | 40758 |
| chr20 | 56247790 | 56247907 | E074 | 41761 |
| chr20 | 56247953 | 56248057 | E074 | 41924 |
| chr20 | 56248366 | 56248455 | E074 | 42337 |
| chr20 | 56252915 | 56252965 | E074 | 46886 |
| chr20 | 56253453 | 56253984 | E074 | 47424 |
| chr20 | 56171775 | 56171845 | E081 | -34184 |
| chr20 | 56171849 | 56172588 | E081 | -33441 |
| chr20 | 56202667 | 56202811 | E081 | -3218 |
| chr20 | 56235796 | 56236038 | E081 | 29767 |
| chr20 | 56236214 | 56236693 | E081 | 30185 |
| chr20 | 56236850 | 56237049 | E081 | 30821 |
| chr20 | 56242317 | 56242414 | E081 | 36288 |
| chr20 | 56242579 | 56242824 | E081 | 36550 |
| chr20 | 56243081 | 56243337 | E081 | 37052 |
| chr20 | 56245525 | 56245605 | E081 | 39496 |
| chr20 | 56245656 | 56245738 | E081 | 39627 |
| chr20 | 56245874 | 56245924 | E081 | 39845 |
| chr20 | 56245993 | 56246068 | E081 | 39964 |
| chr20 | 56246129 | 56246213 | E081 | 40100 |
| chr20 | 56246507 | 56246638 | E081 | 40478 |
| chr20 | 56246787 | 56247746 | E081 | 40758 |
| chr20 | 56247790 | 56247907 | E081 | 41761 |
| chr20 | 56247953 | 56248057 | E081 | 41924 |
| chr20 | 56248366 | 56248455 | E081 | 42337 |
| chr20 | 56248559 | 56248639 | E081 | 42530 |
| chr20 | 56248737 | 56248924 | E081 | 42708 |
| chr20 | 56252140 | 56252275 | E081 | 46111 |
| chr20 | 56252281 | 56252722 | E081 | 46252 |
| chr20 | 56253244 | 56253333 | E081 | 47215 |
| chr20 | 56253453 | 56253984 | E081 | 47424 |
| chr20 | 56157396 | 56158502 | E082 | -47527 |
| chr20 | 56234690 | 56234763 | E082 | 28661 |
| chr20 | 56244935 | 56245055 | E082 | 38906 |
| chr20 | 56245353 | 56245476 | E082 | 39324 |
| chr20 | 56245525 | 56245605 | E082 | 39496 |
| chr20 | 56245656 | 56245738 | E082 | 39627 |
| chr20 | 56246507 | 56246638 | E082 | 40478 |
| chr20 | 56247953 | 56248057 | E082 | 41924 |
| chr20 | 56248366 | 56248455 | E082 | 42337 |
| chr20 | 56248559 | 56248639 | E082 | 42530 |
| chr20 | 56253175 | 56253225 | E082 | 47146 |
| chr20 | 56253244 | 56253333 | E082 | 47215 |
| chr20 | 56253453 | 56253984 | E082 | 47424 |
| chr20 | 56254030 | 56254161 | E082 | 48001 |
| chr20 | 56254234 | 56254594 | E082 | 48205 |