rs7208821

Homo sapiens
C>T
MYH10 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
T=0041 (1254/29974,GnomAD)
T=0027 (797/29118,TOPMED)
T=0056 (281/5008,1000G)
T=0024 (94/3854,ALSPAC)
T=0023 (84/3708,TWINSUK)
chr17:8573425 (GRCh38.p7) (17p13.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 17NC_000017.11:g.8573425C>T
GRCh37.p13 chr 17NC_000017.10:g.8476743C>T
MYH10 RefSeqGeneNG_042305.1:g.62337G>A

Gene: MYH10, myosin, heavy chain 10, non-muscle(minus strand)

Molecule type Change Amino acid[Codon] SO Term
MYH10 transcript variant 1NM_001256012.1:c.N/AIntron Variant
MYH10 transcript variant 3NM_001256095.1:c.N/AIntron Variant
MYH10 transcript variant 2NM_005964.3:c.N/AIntron Variant
MYH10 transcript variant X10XM_011523875.2:c.N/AIntron Variant
MYH10 transcript variant X1XM_011523878.2:c.N/AIntron Variant
MYH10 transcript variant X2XM_011523879.2:c.N/AIntron Variant
MYH10 transcript variant X3XM_011523880.2:c.N/AIntron Variant
MYH10 transcript variant X4XM_017024677.1:c.N/AIntron Variant
MYH10 transcript variant X5XM_017024678.1:c.N/AIntron Variant
MYH10 transcript variant X6XM_017024679.1:c.N/AIntron Variant
MYH10 transcript variant X7XM_017024680.1:c.N/AIntron Variant
MYH10 transcript variant X8XM_017024681.1:c.N/AIntron Variant
MYH10 transcript variant X9XM_017024682.1:c.N/AIntron Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.970T=0.030
1000GenomesAmericanSub694C=0.980T=0.020
1000GenomesEast AsianSub1008C=0.807T=0.193
1000GenomesEuropeSub1006C=0.978T=0.022
1000GenomesGlobalStudy-wide5008C=0.944T=0.056
1000GenomesSouth AsianSub978C=0.990T=0.010
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.976T=0.024
The Genome Aggregation DatabaseAfricanSub8722C=0.967T=0.033
The Genome Aggregation DatabaseAmericanSub838C=0.990T=0.010
The Genome Aggregation DatabaseEast AsianSub1620C=0.810T=0.190
The Genome Aggregation DatabaseEuropeSub18492C=0.965T=0.034
The Genome Aggregation DatabaseGlobalStudy-wide29974C=0.958T=0.041
The Genome Aggregation DatabaseOtherSub302C=0.970T=0.030
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.972T=0.027
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.977T=0.023
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs72088210.000741alcohol dependence21314694

eQTL of rs7208821 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7208821 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr1785095718510185E06732828
chr1785101928510258E06733449
chr1785249598525238E06748216
chr1785252818525535E06748538
chr1785256508525762E06748907
chr1785095718510185E06832828
chr1785101928510258E06833449
chr1785095718510185E06932828
chr1785101928510258E06933449
chr1784664628466611E070-10132
chr1784841958485211E0707452
chr1785095718510185E07032828
chr1785101928510258E07033449
chr1785118078512156E07035064
chr1785241338524216E07047390
chr1785243898524455E07047646
chr1785246128524714E07047869
chr1785249598525238E07048216
chr1785252818525535E07048538
chr1785256508525762E07048907
chr1785095718510185E07132828
chr1785101928510258E07133449
chr1785095718510185E07332828
chr1785101928510258E07333449
chr1784393358439603E081-37140
chr1785095718510185E08132828
chr1785101928510258E08133449
chr1785241338524216E08147390
chr1785243898524455E08147646
chr1785246128524714E08147869
chr1785249598525238E08148216
chr1784393358439603E082-37140
chr1784664628466611E082-10132
chr1784841958485211E0827452
chr1785095718510185E08232828
chr1785101928510258E08233449
chr1785241338524216E08247390
chr1785243898524455E08247646