Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 12 | NC_000012.12:g.69442845T>C |
GRCh37.p13 chr 12 | NC_000012.11:g.69836625T>C |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | T=0.620 | C=0.380 |
1000Genomes | American | Sub | 694 | T=0.880 | C=0.120 |
1000Genomes | East Asian | Sub | 1008 | T=0.999 | C=0.001 |
1000Genomes | Europe | Sub | 1006 | T=0.829 | C=0.171 |
1000Genomes | Global | Study-wide | 5008 | T=0.836 | C=0.164 |
1000Genomes | South Asian | Sub | 978 | T=0.930 | C=0.070 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | T=0.826 | C=0.174 |
The Genome Aggregation Database | African | Sub | 8596 | T=0.672 | C=0.328 |
The Genome Aggregation Database | American | Sub | 830 | T=0.880 | C=0.120 |
The Genome Aggregation Database | East Asian | Sub | 1618 | T=0.999 | C=0.001 |
The Genome Aggregation Database | Europe | Sub | 18308 | T=0.827 | C=0.172 |
The Genome Aggregation Database | Global | Study-wide | 29652 | T=0.793 | C=0.206 |
The Genome Aggregation Database | Other | Sub | 300 | T=0.850 | C=0.150 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | T=0.762 | C=0.237 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | T=0.818 | C=0.182 |
PMID | Title | Author | Journal |
---|---|---|---|
23958962 | Genome-wide association study of cocaine dependence and related traits: FAM53B identified as a risk gene. | Gelernter J | Mol Psychiatry |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs7312976 | 0.0000144 | cocaine dependence(ALL) | 23958962 |
rs7312976 | 0.0000577 | cocaine dependence(EA) | 23958962 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr12 | 69824813 | 69825510 | E067 | -11115 |
chr12 | 69825537 | 69825875 | E067 | -10750 |
chr12 | 69831076 | 69831126 | E067 | -5499 |
chr12 | 69831265 | 69831390 | E067 | -5235 |
chr12 | 69831406 | 69831491 | E067 | -5134 |
chr12 | 69853128 | 69853614 | E067 | 16503 |
chr12 | 69853841 | 69853891 | E067 | 17216 |
chr12 | 69854181 | 69854294 | E067 | 17556 |
chr12 | 69865949 | 69866018 | E067 | 29324 |
chr12 | 69866347 | 69866397 | E067 | 29722 |
chr12 | 69866792 | 69866852 | E067 | 30167 |
chr12 | 69868282 | 69868573 | E067 | 31657 |
chr12 | 69868741 | 69868791 | E067 | 32116 |
chr12 | 69868916 | 69869653 | E067 | 32291 |
chr12 | 69876463 | 69876525 | E067 | 39838 |
chr12 | 69876934 | 69876988 | E067 | 40309 |
chr12 | 69877143 | 69877197 | E067 | 40518 |
chr12 | 69877639 | 69877772 | E067 | 41014 |
chr12 | 69885966 | 69886010 | E067 | 49341 |
chr12 | 69886046 | 69886126 | E067 | 49421 |
chr12 | 69825537 | 69825875 | E068 | -10750 |
chr12 | 69829525 | 69829633 | E068 | -6992 |
chr12 | 69829705 | 69829789 | E068 | -6836 |
chr12 | 69830125 | 69830175 | E068 | -6450 |
chr12 | 69831076 | 69831126 | E068 | -5499 |
chr12 | 69831265 | 69831390 | E068 | -5235 |
chr12 | 69831406 | 69831491 | E068 | -5134 |
chr12 | 69831640 | 69831807 | E068 | -4818 |
chr12 | 69831978 | 69832028 | E068 | -4597 |
chr12 | 69853128 | 69853614 | E068 | 16503 |
chr12 | 69853841 | 69853891 | E068 | 17216 |
chr12 | 69854181 | 69854294 | E068 | 17556 |
chr12 | 69866792 | 69866852 | E068 | 30167 |
chr12 | 69867443 | 69867607 | E068 | 30818 |
chr12 | 69868282 | 69868573 | E068 | 31657 |
chr12 | 69868741 | 69868791 | E068 | 32116 |
chr12 | 69876463 | 69876525 | E068 | 39838 |
chr12 | 69876934 | 69876988 | E068 | 40309 |
chr12 | 69877143 | 69877197 | E068 | 40518 |
chr12 | 69878101 | 69878310 | E068 | 41476 |
chr12 | 69878335 | 69878448 | E068 | 41710 |
chr12 | 69878460 | 69878575 | E068 | 41835 |
chr12 | 69884504 | 69884773 | E068 | 47879 |
chr12 | 69884792 | 69885007 | E068 | 48167 |
chr12 | 69809320 | 69810516 | E069 | -26109 |
chr12 | 69824813 | 69825510 | E069 | -11115 |
chr12 | 69853128 | 69853614 | E069 | 16503 |
chr12 | 69853841 | 69853891 | E069 | 17216 |
chr12 | 69854181 | 69854294 | E069 | 17556 |
chr12 | 69865949 | 69866018 | E069 | 29324 |
chr12 | 69866347 | 69866397 | E069 | 29722 |
chr12 | 69867443 | 69867607 | E069 | 30818 |
chr12 | 69868015 | 69868088 | E069 | 31390 |
chr12 | 69868282 | 69868573 | E069 | 31657 |
chr12 | 69868741 | 69868791 | E069 | 32116 |
chr12 | 69878460 | 69878575 | E069 | 41835 |
chr12 | 69885966 | 69886010 | E069 | 49341 |
chr12 | 69886046 | 69886126 | E069 | 49421 |
chr12 | 69865949 | 69866018 | E070 | 29324 |
chr12 | 69866347 | 69866397 | E070 | 29722 |
chr12 | 69866792 | 69866852 | E070 | 30167 |
chr12 | 69868015 | 69868088 | E070 | 31390 |
chr12 | 69868282 | 69868573 | E070 | 31657 |
chr12 | 69868741 | 69868791 | E070 | 32116 |
chr12 | 69868916 | 69869653 | E070 | 32291 |
chr12 | 69869863 | 69869931 | E070 | 33238 |
chr12 | 69869964 | 69870025 | E070 | 33339 |
chr12 | 69809320 | 69810516 | E071 | -26109 |
chr12 | 69823209 | 69823259 | E071 | -13366 |
chr12 | 69823370 | 69823492 | E071 | -13133 |
chr12 | 69824813 | 69825510 | E071 | -11115 |
chr12 | 69825537 | 69825875 | E071 | -10750 |
chr12 | 69829525 | 69829633 | E071 | -6992 |
chr12 | 69829705 | 69829789 | E071 | -6836 |
chr12 | 69830125 | 69830175 | E071 | -6450 |
chr12 | 69831076 | 69831126 | E071 | -5499 |
chr12 | 69853128 | 69853614 | E071 | 16503 |
chr12 | 69853841 | 69853891 | E071 | 17216 |
chr12 | 69854181 | 69854294 | E071 | 17556 |
chr12 | 69860388 | 69860476 | E071 | 23763 |
chr12 | 69860607 | 69861091 | E071 | 23982 |
chr12 | 69861112 | 69861166 | E071 | 24487 |
chr12 | 69866347 | 69866397 | E071 | 29722 |
chr12 | 69866792 | 69866852 | E071 | 30167 |
chr12 | 69867443 | 69867607 | E071 | 30818 |
chr12 | 69868015 | 69868088 | E071 | 31390 |
chr12 | 69868282 | 69868573 | E071 | 31657 |
chr12 | 69868741 | 69868791 | E071 | 32116 |
chr12 | 69872900 | 69873000 | E071 | 36275 |
chr12 | 69873853 | 69873907 | E071 | 37228 |
chr12 | 69873911 | 69873961 | E071 | 37286 |
chr12 | 69884356 | 69884410 | E071 | 47731 |
chr12 | 69822096 | 69822705 | E072 | -13920 |
chr12 | 69824813 | 69825510 | E072 | -11115 |
chr12 | 69825537 | 69825875 | E072 | -10750 |
chr12 | 69831406 | 69831491 | E072 | -5134 |
chr12 | 69831640 | 69831807 | E072 | -4818 |
chr12 | 69853128 | 69853614 | E072 | 16503 |
chr12 | 69853841 | 69853891 | E072 | 17216 |
chr12 | 69854181 | 69854294 | E072 | 17556 |
chr12 | 69865949 | 69866018 | E072 | 29324 |
chr12 | 69866347 | 69866397 | E072 | 29722 |
chr12 | 69866792 | 69866852 | E072 | 30167 |
chr12 | 69867443 | 69867607 | E072 | 30818 |
chr12 | 69877143 | 69877197 | E072 | 40518 |
chr12 | 69884792 | 69885007 | E072 | 48167 |
chr12 | 69885089 | 69885250 | E072 | 48464 |
chr12 | 69885966 | 69886010 | E072 | 49341 |
chr12 | 69886046 | 69886126 | E072 | 49421 |
chr12 | 69809320 | 69810516 | E073 | -26109 |
chr12 | 69829393 | 69829443 | E073 | -7182 |
chr12 | 69829525 | 69829633 | E073 | -6992 |
chr12 | 69829705 | 69829789 | E073 | -6836 |
chr12 | 69831076 | 69831126 | E073 | -5499 |
chr12 | 69865949 | 69866018 | E073 | 29324 |
chr12 | 69866347 | 69866397 | E073 | 29722 |
chr12 | 69866792 | 69866852 | E073 | 30167 |
chr12 | 69867443 | 69867607 | E073 | 30818 |
chr12 | 69868015 | 69868088 | E073 | 31390 |
chr12 | 69868282 | 69868573 | E073 | 31657 |
chr12 | 69870042 | 69870487 | E073 | 33417 |
chr12 | 69809320 | 69810516 | E074 | -26109 |
chr12 | 69825537 | 69825875 | E074 | -10750 |
chr12 | 69831406 | 69831491 | E074 | -5134 |
chr12 | 69853128 | 69853614 | E074 | 16503 |
chr12 | 69853841 | 69853891 | E074 | 17216 |
chr12 | 69854181 | 69854294 | E074 | 17556 |
chr12 | 69855749 | 69855798 | E074 | 19124 |
chr12 | 69856219 | 69856297 | E074 | 19594 |
chr12 | 69865949 | 69866018 | E074 | 29324 |
chr12 | 69866347 | 69866397 | E074 | 29722 |
chr12 | 69866792 | 69866852 | E074 | 30167 |
chr12 | 69876463 | 69876525 | E074 | 39838 |
chr12 | 69876934 | 69876988 | E074 | 40309 |
chr12 | 69877143 | 69877197 | E074 | 40518 |
chr12 | 69865949 | 69866018 | E081 | 29324 |
chr12 | 69868015 | 69868088 | E081 | 31390 |
chr12 | 69868282 | 69868573 | E081 | 31657 |
chr12 | 69866792 | 69866852 | E082 | 30167 |
chr12 | 69867443 | 69867607 | E082 | 30818 |
chr12 | 69868015 | 69868088 | E082 | 31390 |
chr12 | 69868282 | 69868573 | E082 | 31657 |
chr12 | 69868741 | 69868791 | E082 | 32116 |
chr12 | 69868916 | 69869653 | E082 | 32291 |
chr12 | 69869863 | 69869931 | E082 | 33238 |
chr12 | 69869964 | 69870025 | E082 | 33339 |
chr12 | 69870042 | 69870487 | E082 | 33417 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr12 | 69863657 | 69865044 | E067 | 27032 |
chr12 | 69865054 | 69865162 | E067 | 28429 |
chr12 | 69863657 | 69865044 | E068 | 27032 |
chr12 | 69865054 | 69865162 | E068 | 28429 |
chr12 | 69863657 | 69865044 | E069 | 27032 |
chr12 | 69865054 | 69865162 | E069 | 28429 |
chr12 | 69863657 | 69865044 | E070 | 27032 |
chr12 | 69865054 | 69865162 | E070 | 28429 |
chr12 | 69863657 | 69865044 | E071 | 27032 |
chr12 | 69865054 | 69865162 | E071 | 28429 |
chr12 | 69863657 | 69865044 | E072 | 27032 |
chr12 | 69865054 | 69865162 | E072 | 28429 |
chr12 | 69863657 | 69865044 | E073 | 27032 |
chr12 | 69865054 | 69865162 | E073 | 28429 |
chr12 | 69863657 | 69865044 | E074 | 27032 |
chr12 | 69865054 | 69865162 | E074 | 28429 |
chr12 | 69863657 | 69865044 | E081 | 27032 |
chr12 | 69865054 | 69865162 | E081 | 28429 |
chr12 | 69863657 | 69865044 | E082 | 27032 |
chr12 | 69865054 | 69865162 | E082 | 28429 |