rs7322415

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
C==0115 (3458/29954,GnomAD)
C==0141 (4117/29118,TOPMED)
C==0111 (556/5008,1000G)
C==0054 (210/3854,ALSPAC)
C==0055 (203/3708,TWINSUK)
chr13:109264613 (GRCh38.p7) (13q33.3)
AD
GWASdb2
1   publication(s)
See rs on genome
11 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.109264613C>T
GRCh37.p13 chr 13NC_000013.10:g.109916961C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.284T=0.716
1000GenomesAmericanSub694C=0.060T=0.940
1000GenomesEast AsianSub1008C=0.000T=1.000
1000GenomesEuropeSub1006C=0.066T=0.934
1000GenomesGlobalStudy-wide5008C=0.111T=0.889
1000GenomesSouth AsianSub978C=0.080T=0.920
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.054T=0.946
The Genome Aggregation DatabaseAfricanSub8704C=0.252T=0.748
The Genome Aggregation DatabaseAmericanSub838C=0.040T=0.960
The Genome Aggregation DatabaseEast AsianSub1620C=0.000T=1.000
The Genome Aggregation DatabaseEuropeSub18490C=0.066T=0.933
The Genome Aggregation DatabaseGlobalStudy-wide29954C=0.115T=0.884
The Genome Aggregation DatabaseOtherSub302C=0.040T=0.960
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.141T=0.858
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.055T=0.945
PMID Title Author Journal
23953852Genome-wide association studies of maximum number of drinks.Pan YJ Psychiatr Res

P-Value

SNP ID p-value Traits Study
rs73224154.4E-05alcohol consumption23953852

eQTL of rs7322415 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7322415 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr13109895164109896513E067-20448
chr13109895164109896513E069-20448
chr13109895164109896513E070-20448
chr13109896528109896648E070-20313
chr13109896665109897420E070-19541
chr13109895164109896513E072-20448
chr13109927590109928219E08110629
chr13109928260109928591E08111299
chr13109933132109933215E08116171
chr13109896528109896648E082-20313
chr13109896665109897420E082-19541