rs7322577

Homo sapiens
T>A / T>G
FGF14 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
G=0191 (5733/29918,GnomAD)
G=0185 (5396/29118,TOPMED)
G=0194 (971/5008,1000G)
chr13:102184424 (GRCh38.p7) (13q33.1)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.102184424T>A
GRCh38.p7 chr 13NC_000013.11:g.102184424T>G
GRCh37.p13 chr 13NC_000013.10:g.102836774T>A
GRCh37.p13 chr 13NC_000013.10:g.102836774T>G
FGF14 RefSeqGeneNG_008317.1:g.222351A>T
FGF14 RefSeqGeneNG_008317.1:g.222351A>C

Gene: FGF14, fibroblast growth factor 14(minus strand)

Molecule type Change Amino acid[Codon] SO Term
FGF14 transcript variant 3NM_001321931.1:c.N/AIntron Variant
FGF14 transcript variant 4NM_001321932.1:c.N/AIntron Variant
FGF14 transcript variant 5NM_001321933.1:c.N/AIntron Variant
FGF14 transcript variant 6NM_001321934.1:c.N/AIntron Variant
FGF14 transcript variant 7NM_001321935.1:c.N/AIntron Variant
FGF14 transcript variant 8NM_001321936.1:c.N/AIntron Variant
FGF14 transcript variant 9NM_001321937.1:c.N/AIntron Variant
FGF14 transcript variant 10NM_001321938.1:c.N/AIntron Variant
FGF14 transcript variant 11NM_001321939.1:c.N/AIntron Variant
FGF14 transcript variant 12NM_001321940.1:c.N/AIntron Variant
FGF14 transcript variant 13NM_001321941.1:c.N/AIntron Variant
FGF14 transcript variant 14NM_001321942.1:c.N/AIntron Variant
FGF14 transcript variant 15NM_001321943.1:c.N/AIntron Variant
FGF14 transcript variant 16NM_001321944.1:c.N/AIntron Variant
FGF14 transcript variant 17NM_001321945.1:c.N/AIntron Variant
FGF14 transcript variant 18NM_001321946.1:c.N/AIntron Variant
FGF14 transcript variant 19NM_001321947.1:c.N/AIntron Variant
FGF14 transcript variant 20NM_001321948.1:c.N/AIntron Variant
FGF14 transcript variant 21NM_001321949.1:c.N/AIntron Variant
FGF14 transcript variant 2NM_175929.2:c.N/AIntron Variant
FGF14 transcript variant 1NM_004115.3:c.N/AGenic Upstream Transcript Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.840G=0.160
1000GenomesAmericanSub694T=0.880G=0.120
1000GenomesEast AsianSub1008T=0.773G=0.227
1000GenomesEuropeSub1006T=0.783G=0.217
1000GenomesGlobalStudy-wide5008T=0.806G=0.194
1000GenomesSouth AsianSub978T=0.760G=0.240
The Genome Aggregation DatabaseAfricanSub8708T=0.827G=0.173
The Genome Aggregation DatabaseAmericanSub836T=0.900G=0.100
The Genome Aggregation DatabaseEast AsianSub1594T=0.775G=0.225
The Genome Aggregation DatabaseEuropeSub18478T=0.797G=0.202
The Genome Aggregation DatabaseGlobalStudy-wide29918T=0.808G=0.191
The Genome Aggregation DatabaseOtherSub302T=0.840G=0.160
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.814G=0.185
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs73225770.000419alcohol dependence20201924

eQTL of rs7322577 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7322577 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction