Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 13 | NC_000013.11:g.87085592A>G |
GRCh37.p13 chr 13 | NC_000013.10:g.87737847A>G |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | A=0.830 | G=0.170 |
1000Genomes | American | Sub | 694 | A=0.920 | G=0.080 |
1000Genomes | East Asian | Sub | 1008 | A=0.968 | G=0.032 |
1000Genomes | Europe | Sub | 1006 | A=0.906 | G=0.094 |
1000Genomes | Global | Study-wide | 5008 | A=0.896 | G=0.104 |
1000Genomes | South Asian | Sub | 978 | A=0.890 | G=0.110 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.896 | G=0.104 |
The Genome Aggregation Database | African | Sub | 8710 | A=0.827 | G=0.173 |
The Genome Aggregation Database | American | Sub | 834 | A=0.930 | G=0.070 |
The Genome Aggregation Database | East Asian | Sub | 1620 | A=0.954 | G=0.046 |
The Genome Aggregation Database | Europe | Sub | 18450 | A=0.914 | G=0.086 |
The Genome Aggregation Database | Global | Study-wide | 29916 | A=0.890 | G=0.109 |
The Genome Aggregation Database | Other | Sub | 302 | A=0.850 | G=0.150 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.871 | G=0.128 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.896 | G=0.104 |
PMID | Title | Author | Journal |
---|---|---|---|
23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs7323320 | 0.000115 | alcohol consumption | 23743675 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr13 | 87780751 | 87780970 | E070 | 42904 |
chr13 | 87780990 | 87781070 | E070 | 43143 |
chr13 | 87781139 | 87781194 | E070 | 43292 |
chr13 | 87781361 | 87781523 | E070 | 43514 |
chr13 | 87781609 | 87781698 | E070 | 43762 |
chr13 | 87781897 | 87782225 | E070 | 44050 |
chr13 | 87782248 | 87782420 | E070 | 44401 |
chr13 | 87782730 | 87782844 | E070 | 44883 |
chr13 | 87783996 | 87784117 | E070 | 46149 |