rs7328507

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0426 (12766/29914,GnomAD)
T==0488 (14236/29116,TOPMED)
C=0433 (2166/5008,1000G)
T==0364 (1401/3854,ALSPAC)
T==0371 (1374/3708,TWINSUK)
chr13:38448054 (GRCh38.p7) (13q13.3)
ND
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.38448054T>C
GRCh37.p13 chr 13NC_000013.10:g.39022191T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.593C=0.407
1000GenomesAmericanSub694T=0.500C=0.500
1000GenomesEast AsianSub1008T=0.687C=0.313
1000GenomesEuropeSub1006T=0.342C=0.658
1000GenomesGlobalStudy-wide5008T=0.567C=0.433
1000GenomesSouth AsianSub978T=0.690C=0.310
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.364C=0.636
The Genome Aggregation DatabaseAfricanSub8696T=0.602C=0.398
The Genome Aggregation DatabaseAmericanSub836T=0.510C=0.490
The Genome Aggregation DatabaseEast AsianSub1608T=0.667C=0.333
The Genome Aggregation DatabaseEuropeSub18474T=0.318C=0.681
The Genome Aggregation DatabaseGlobalStudy-wide29914T=0.426C=0.573
The Genome Aggregation DatabaseOtherSub300T=0.520C=0.480
Trans-Omics for Precision MedicineGlobalStudy-wide29116T=0.488C=0.511
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.371C=0.629
PMID Title Author Journal
20158304A genomewide association study of nicotine and alcohol dependence in Australian and Dutch populations.Lind PATwin Res Hum Genet

P-Value

SNP ID p-value Traits Study
rs73285072.43E-05alcohol and nictotine co-dependence20158304

eQTL of rs7328507 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7328507 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.