rs7331929

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0269 (8068/29948,GnomAD)
G=0237 (6925/29116,TOPMED)
G=0237 (1186/5008,1000G)
G=0269 (1037/3854,ALSPAC)
G=0269 (999/3708,TWINSUK)
chr13:42720353 (GRCh38.p7) (13q14.11)
AD
GWASdb2
1   publication(s)
See rs on genome
18 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 13NC_000013.11:g.42720353A>G
GRCh37.p13 chr 13NC_000013.10:g.43294489A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.789G=0.211
1000GenomesAmericanSub694A=0.660G=0.340
1000GenomesEast AsianSub1008A=0.878G=0.122
1000GenomesEuropeSub1006A=0.692G=0.308
1000GenomesGlobalStudy-wide5008A=0.763G=0.237
1000GenomesSouth AsianSub978A=0.750G=0.250
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.731G=0.269
The Genome Aggregation DatabaseAfricanSub8724A=0.791G=0.209
The Genome Aggregation DatabaseAmericanSub838A=0.680G=0.320
The Genome Aggregation DatabaseEast AsianSub1612A=0.836G=0.164
The Genome Aggregation DatabaseEuropeSub18472A=0.696G=0.303
The Genome Aggregation DatabaseGlobalStudy-wide29948A=0.730G=0.269
The Genome Aggregation DatabaseOtherSub302A=0.650G=0.350
Trans-Omics for Precision MedicineGlobalStudy-wide29116A=0.762G=0.237
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.731G=0.269
PMID Title Author Journal
24277619ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.Quillen EEAm J Med Genet B Neuropsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs73319290.00031alcohol consumption (maxi-drinks)24277619

eQTL of rs7331929 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7331929 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr134332110843322358E07026619
chr134332441843324518E07029929
chr134332476843324847E07030279
chr134332486443324961E07030375
chr134332504243325279E07030553
chr134332528843325470E07030799
chr134332441843324518E08129929
chr134332476843324847E08130279
chr134332486443324961E08130375
chr134332504243325279E08130553
chr134332528843325470E08130799
chr134332565543325868E08131166
chr134332751343327655E08133024
chr134332767343328325E08133184
chr134327660243277257E082-17232
chr134332504243325279E08230553
chr134332528843325470E08230799
chr134332565543325868E08231166