| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 11 | NC_000011.10:g.80799224A>G |
| GRCh37.p13 chr 11 | NC_000011.9:g.80510267A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.945 | G=0.055 |
| 1000Genomes | American | Sub | 694 | A=0.980 | G=0.020 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.952 | G=0.048 |
| 1000Genomes | Europe | Sub | 1006 | A=0.965 | G=0.035 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.964 | G=0.036 |
| 1000Genomes | South Asian | Sub | 978 | A=0.990 | G=0.010 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.979 | G=0.021 |
| The Genome Aggregation Database | African | Sub | 8692 | A=0.941 | G=0.059 |
| The Genome Aggregation Database | American | Sub | 838 | A=0.980 | G=0.020 |
| The Genome Aggregation Database | East Asian | Sub | 1620 | A=0.965 | G=0.035 |
| The Genome Aggregation Database | Europe | Sub | 18494 | A=0.962 | G=0.038 |
| The Genome Aggregation Database | Global | Study-wide | 29946 | A=0.956 | G=0.043 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.970 | G=0.030 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.959 | G=0.040 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.977 | G=0.023 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 29071344 | Genetic Risk Variants Associated With Comorbid Alcohol Dependence and Major Depression. | Zhou H | JAMA Psychiatry |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs73513496 | 4E-06 | alcohol dependence | 29071344 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr11 | 80538421 | 80538696 | E070 | 28154 |
| chr11 | 80539021 | 80539094 | E070 | 28754 |
| chr11 | 80539620 | 80539670 | E070 | 29353 |
| chr11 | 80460304 | 80460354 | E081 | -49913 |
| chr11 | 80460304 | 80460354 | E082 | -49913 |
| chr11 | 80460799 | 80460859 | E082 | -49408 |