rs737383

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0470 (14086/29918,GnomAD)
T==0445 (12976/29118,TOPMED)
T==0398 (1993/5008,1000G)
C=0436 (1679/3854,ALSPAC)
C=0422 (1563/3708,TWINSUK)
chr11:92931709 (GRCh38.p7) (11q14.3)
ND
GWASdb2
1   publication(s)
See rs on genome
24 Enhancers around
10 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.92931709T>C
GRCh37.p13 chr 11NC_000011.9:g.92664875T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.275C=0.725
1000GenomesAmericanSub694T=0.380C=0.620
1000GenomesEast AsianSub1008T=0.389C=0.611
1000GenomesEuropeSub1006T=0.573C=0.427
1000GenomesGlobalStudy-wide5008T=0.398C=0.602
1000GenomesSouth AsianSub978T=0.400C=0.600
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.564C=0.436
The Genome Aggregation DatabaseAfricanSub8700T=0.285C=0.715
The Genome Aggregation DatabaseAmericanSub838T=0.380C=0.620
The Genome Aggregation DatabaseEast AsianSub1616T=0.399C=0.601
The Genome Aggregation DatabaseEuropeSub18462T=0.566C=0.434
The Genome Aggregation DatabaseGlobalStudy-wide29918T=0.470C=0.529
The Genome Aggregation DatabaseOtherSub302T=0.630C=0.370
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.445C=0.554
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.578C=0.422
PMID Title Author Journal
19268276Genome-wide association study of smoking initiation and current smoking.Vink JMAm J Hum Genet

P-Value

SNP ID p-value Traits Study
rs7373839.65E-05nicotine smoking19268276

eQTL of rs737383 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs737383 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr119271149892712815E06746623
chr119262405392624920E068-39955
chr119265344892653986E069-10889
chr119271149892712815E06946623
chr119262836692628416E070-36459
chr119262844292628561E070-36314
chr119264131692641559E070-23316
chr119264195292642002E070-22873
chr119267567492675724E07010799
chr119271149892712815E07046623
chr119271285692712900E07047981
chr119262405392624920E071-39955
chr119265344892653986E071-10889
chr119265411892654183E071-10692
chr119269306692693116E07128191
chr119271149892712815E07146623
chr119262405392624920E073-39955
chr119262405392624920E074-39955
chr119271149892712815E07446623
chr119261834892619872E081-45003
chr119261993092619980E081-44895
chr119261998492620034E081-44841
chr119271149892712815E08146623
chr119271149892712815E08246623









Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr119270308892703217E06738213
chr119270308892703217E06838213
chr119270259692702960E06937721
chr119270308892703217E06938213
chr119270259692702960E07137721
chr119270237392702578E07237498
chr119270259692702960E07237721
chr119270308892703217E07238213
chr119270237392702578E07337498
chr119270259692702960E07337721