| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 11 | NC_000011.10:g.34166300G>A |
| GRCh37.p13 chr 11 | NC_000011.9:g.34187847G>A |
| Molecule type | Change | Amino acid[Codon] | SO Term |
|---|---|---|---|
| ABTB2 transcript | NM_145804.2:c. | N/A | Intron Variant |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | G=0.868 | A=0.132 |
| 1000Genomes | American | Sub | 694 | G=1.000 | A=0.000 |
| 1000Genomes | East Asian | Sub | 1008 | G=1.000 | A=0.000 |
| 1000Genomes | Europe | Sub | 1006 | G=0.997 | A=0.003 |
| 1000Genomes | Global | Study-wide | 5008 | G=0.964 | A=0.036 |
| 1000Genomes | South Asian | Sub | 978 | G=1.000 | A=0.000 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.999 | A=0.001 |
| The Genome Aggregation Database | African | Sub | 8708 | G=0.885 | A=0.115 |
| The Genome Aggregation Database | American | Sub | 838 | G=0.990 | A=0.010 |
| The Genome Aggregation Database | East Asian | Sub | 1622 | G=1.000 | A=0.000 |
| The Genome Aggregation Database | Europe | Sub | 18490 | G=0.998 | A=0.001 |
| The Genome Aggregation Database | Global | Study-wide | 29960 | G=0.965 | A=0.034 |
| The Genome Aggregation Database | Other | Sub | 302 | G=1.000 | A=0.000 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.950 | A=0.049 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.999 | A=0.001 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs745809 | 0.000342 | alcohol dependence | 21314694 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr11 | 34177293 | 34177589 | E067 | -10258 |
| chr11 | 34177718 | 34177823 | E067 | -10024 |
| chr11 | 34177943 | 34178015 | E067 | -9832 |
| chr11 | 34195465 | 34195657 | E067 | 7618 |
| chr11 | 34200752 | 34201043 | E067 | 12905 |
| chr11 | 34201288 | 34201338 | E067 | 13441 |
| chr11 | 34201638 | 34202215 | E067 | 13791 |
| chr11 | 34202471 | 34203214 | E067 | 14624 |
| chr11 | 34203265 | 34203305 | E067 | 15418 |
| chr11 | 34203684 | 34203764 | E067 | 15837 |
| chr11 | 34207560 | 34207708 | E067 | 19713 |
| chr11 | 34207768 | 34208588 | E067 | 19921 |
| chr11 | 34213254 | 34213480 | E067 | 25407 |
| chr11 | 34213506 | 34213566 | E067 | 25659 |
| chr11 | 34213749 | 34213803 | E067 | 25902 |
| chr11 | 34213838 | 34213888 | E067 | 25991 |
| chr11 | 34227981 | 34228991 | E067 | 40134 |
| chr11 | 34177069 | 34177205 | E068 | -10642 |
| chr11 | 34177293 | 34177589 | E068 | -10258 |
| chr11 | 34177718 | 34177823 | E068 | -10024 |
| chr11 | 34195465 | 34195657 | E068 | 7618 |
| chr11 | 34197880 | 34198103 | E068 | 10033 |
| chr11 | 34198107 | 34198420 | E068 | 10260 |
| chr11 | 34198449 | 34198561 | E068 | 10602 |
| chr11 | 34198611 | 34198809 | E068 | 10764 |
| chr11 | 34199076 | 34199173 | E068 | 11229 |
| chr11 | 34199438 | 34199562 | E068 | 11591 |
| chr11 | 34199944 | 34200058 | E068 | 12097 |
| chr11 | 34200152 | 34200281 | E068 | 12305 |
| chr11 | 34200381 | 34200431 | E068 | 12534 |
| chr11 | 34200752 | 34201043 | E068 | 12905 |
| chr11 | 34201288 | 34201338 | E068 | 13441 |
| chr11 | 34201638 | 34202215 | E068 | 13791 |
| chr11 | 34202222 | 34202352 | E068 | 14375 |
| chr11 | 34202353 | 34202403 | E068 | 14506 |
| chr11 | 34202471 | 34203214 | E068 | 14624 |
| chr11 | 34203265 | 34203305 | E068 | 15418 |
| chr11 | 34203684 | 34203764 | E068 | 15837 |
| chr11 | 34207560 | 34207708 | E068 | 19713 |
| chr11 | 34207768 | 34208588 | E068 | 19921 |
| chr11 | 34213254 | 34213480 | E068 | 25407 |
| chr11 | 34213506 | 34213566 | E068 | 25659 |
| chr11 | 34213749 | 34213803 | E068 | 25902 |
| chr11 | 34213838 | 34213888 | E068 | 25991 |
| chr11 | 34214041 | 34215051 | E068 | 26194 |
| chr11 | 34177069 | 34177205 | E069 | -10642 |
| chr11 | 34177293 | 34177589 | E069 | -10258 |
| chr11 | 34197880 | 34198103 | E069 | 10033 |
| chr11 | 34198107 | 34198420 | E069 | 10260 |
| chr11 | 34198449 | 34198561 | E069 | 10602 |
| chr11 | 34198611 | 34198809 | E069 | 10764 |
| chr11 | 34199076 | 34199173 | E069 | 11229 |
| chr11 | 34199438 | 34199562 | E069 | 11591 |
| chr11 | 34199944 | 34200058 | E069 | 12097 |
| chr11 | 34200152 | 34200281 | E069 | 12305 |
| chr11 | 34200381 | 34200431 | E069 | 12534 |
| chr11 | 34200752 | 34201043 | E069 | 12905 |
| chr11 | 34201288 | 34201338 | E069 | 13441 |
| chr11 | 34201638 | 34202215 | E069 | 13791 |
| chr11 | 34202222 | 34202352 | E069 | 14375 |
| chr11 | 34202353 | 34202403 | E069 | 14506 |
| chr11 | 34202471 | 34203214 | E069 | 14624 |
| chr11 | 34203265 | 34203305 | E069 | 15418 |
| chr11 | 34203684 | 34203764 | E069 | 15837 |
| chr11 | 34207560 | 34207708 | E069 | 19713 |
| chr11 | 34207768 | 34208588 | E069 | 19921 |
| chr11 | 34213178 | 34213228 | E069 | 25331 |
| chr11 | 34213254 | 34213480 | E069 | 25407 |
| chr11 | 34213506 | 34213566 | E069 | 25659 |
| chr11 | 34213749 | 34213803 | E069 | 25902 |
| chr11 | 34213838 | 34213888 | E069 | 25991 |
| chr11 | 34214041 | 34215051 | E069 | 26194 |
| chr11 | 34215149 | 34215281 | E069 | 27302 |
| chr11 | 34215391 | 34215543 | E069 | 27544 |
| chr11 | 34215595 | 34215805 | E069 | 27748 |
| chr11 | 34215895 | 34216090 | E069 | 28048 |
| chr11 | 34231457 | 34231703 | E069 | 43610 |
| chr11 | 34187447 | 34188169 | E070 | 0 |
| chr11 | 34195224 | 34195387 | E070 | 7377 |
| chr11 | 34197880 | 34198103 | E070 | 10033 |
| chr11 | 34198107 | 34198420 | E070 | 10260 |
| chr11 | 34198449 | 34198561 | E070 | 10602 |
| chr11 | 34198611 | 34198809 | E070 | 10764 |
| chr11 | 34199076 | 34199173 | E070 | 11229 |
| chr11 | 34199438 | 34199562 | E070 | 11591 |
| chr11 | 34205948 | 34206106 | E070 | 18101 |
| chr11 | 34206157 | 34206207 | E070 | 18310 |
| chr11 | 34206238 | 34206309 | E070 | 18391 |
| chr11 | 34206458 | 34206571 | E070 | 18611 |
| chr11 | 34206608 | 34206658 | E070 | 18761 |
| chr11 | 34206968 | 34207272 | E070 | 19121 |
| chr11 | 34208705 | 34208755 | E070 | 20858 |
| chr11 | 34210239 | 34210454 | E070 | 22392 |
| chr11 | 34210459 | 34210518 | E070 | 22612 |
| chr11 | 34210587 | 34210723 | E070 | 22740 |
| chr11 | 34213749 | 34213803 | E070 | 25902 |
| chr11 | 34213838 | 34213888 | E070 | 25991 |
| chr11 | 34214041 | 34215051 | E070 | 26194 |
| chr11 | 34215149 | 34215281 | E070 | 27302 |
| chr11 | 34215391 | 34215543 | E070 | 27544 |
| chr11 | 34215595 | 34215805 | E070 | 27748 |
| chr11 | 34215895 | 34216090 | E070 | 28048 |
| chr11 | 34216104 | 34216296 | E070 | 28257 |
| chr11 | 34226243 | 34227112 | E070 | 38396 |
| chr11 | 34227229 | 34227541 | E070 | 39382 |
| chr11 | 34227981 | 34228991 | E070 | 40134 |
| chr11 | 34176606 | 34177034 | E071 | -10813 |
| chr11 | 34177069 | 34177205 | E071 | -10642 |
| chr11 | 34177293 | 34177589 | E071 | -10258 |
| chr11 | 34177718 | 34177823 | E071 | -10024 |
| chr11 | 34197880 | 34198103 | E071 | 10033 |
| chr11 | 34198107 | 34198420 | E071 | 10260 |
| chr11 | 34198449 | 34198561 | E071 | 10602 |
| chr11 | 34198611 | 34198809 | E071 | 10764 |
| chr11 | 34199076 | 34199173 | E071 | 11229 |
| chr11 | 34199438 | 34199562 | E071 | 11591 |
| chr11 | 34199944 | 34200058 | E071 | 12097 |
| chr11 | 34200152 | 34200281 | E071 | 12305 |
| chr11 | 34200381 | 34200431 | E071 | 12534 |
| chr11 | 34200752 | 34201043 | E071 | 12905 |
| chr11 | 34201288 | 34201338 | E071 | 13441 |
| chr11 | 34201638 | 34202215 | E071 | 13791 |
| chr11 | 34202222 | 34202352 | E071 | 14375 |
| chr11 | 34202353 | 34202403 | E071 | 14506 |
| chr11 | 34202471 | 34203214 | E071 | 14624 |
| chr11 | 34203265 | 34203305 | E071 | 15418 |
| chr11 | 34203684 | 34203764 | E071 | 15837 |
| chr11 | 34204257 | 34204317 | E071 | 16410 |
| chr11 | 34205136 | 34205180 | E071 | 17289 |
| chr11 | 34205189 | 34205239 | E071 | 17342 |
| chr11 | 34205948 | 34206106 | E071 | 18101 |
| chr11 | 34206157 | 34206207 | E071 | 18310 |
| chr11 | 34206238 | 34206309 | E071 | 18391 |
| chr11 | 34206458 | 34206571 | E071 | 18611 |
| chr11 | 34206608 | 34206658 | E071 | 18761 |
| chr11 | 34206968 | 34207272 | E071 | 19121 |
| chr11 | 34207560 | 34207708 | E071 | 19713 |
| chr11 | 34207768 | 34208588 | E071 | 19921 |
| chr11 | 34208705 | 34208755 | E071 | 20858 |
| chr11 | 34213254 | 34213480 | E071 | 25407 |
| chr11 | 34213506 | 34213566 | E071 | 25659 |
| chr11 | 34213749 | 34213803 | E071 | 25902 |
| chr11 | 34213838 | 34213888 | E071 | 25991 |
| chr11 | 34214041 | 34215051 | E071 | 26194 |
| chr11 | 34215149 | 34215281 | E071 | 27302 |
| chr11 | 34215391 | 34215543 | E071 | 27544 |
| chr11 | 34216802 | 34216856 | E071 | 28955 |
| chr11 | 34222648 | 34222747 | E071 | 34801 |
| chr11 | 34227981 | 34228991 | E071 | 40134 |
| chr11 | 34229084 | 34229172 | E071 | 41237 |
| chr11 | 34229227 | 34229298 | E071 | 41380 |
| chr11 | 34229479 | 34229701 | E071 | 41632 |
| chr11 | 34229711 | 34229775 | E071 | 41864 |
| chr11 | 34229920 | 34229997 | E071 | 42073 |
| chr11 | 34231457 | 34231703 | E071 | 43610 |
| chr11 | 34232092 | 34232142 | E071 | 44245 |
| chr11 | 34232254 | 34232304 | E071 | 44407 |
| chr11 | 34176606 | 34177034 | E072 | -10813 |
| chr11 | 34177069 | 34177205 | E072 | -10642 |
| chr11 | 34177293 | 34177589 | E072 | -10258 |
| chr11 | 34177718 | 34177823 | E072 | -10024 |
| chr11 | 34177943 | 34178015 | E072 | -9832 |
| chr11 | 34195465 | 34195657 | E072 | 7618 |
| chr11 | 34198611 | 34198809 | E072 | 10764 |
| chr11 | 34199076 | 34199173 | E072 | 11229 |
| chr11 | 34199438 | 34199562 | E072 | 11591 |
| chr11 | 34199944 | 34200058 | E072 | 12097 |
| chr11 | 34200152 | 34200281 | E072 | 12305 |
| chr11 | 34201638 | 34202215 | E072 | 13791 |
| chr11 | 34202222 | 34202352 | E072 | 14375 |
| chr11 | 34202353 | 34202403 | E072 | 14506 |
| chr11 | 34202471 | 34203214 | E072 | 14624 |
| chr11 | 34203265 | 34203305 | E072 | 15418 |
| chr11 | 34203684 | 34203764 | E072 | 15837 |
| chr11 | 34205136 | 34205180 | E072 | 17289 |
| chr11 | 34205189 | 34205239 | E072 | 17342 |
| chr11 | 34205948 | 34206106 | E072 | 18101 |
| chr11 | 34206157 | 34206207 | E072 | 18310 |
| chr11 | 34206238 | 34206309 | E072 | 18391 |
| chr11 | 34207560 | 34207708 | E072 | 19713 |
| chr11 | 34207768 | 34208588 | E072 | 19921 |
| chr11 | 34213178 | 34213228 | E072 | 25331 |
| chr11 | 34213254 | 34213480 | E072 | 25407 |
| chr11 | 34213506 | 34213566 | E072 | 25659 |
| chr11 | 34213749 | 34213803 | E072 | 25902 |
| chr11 | 34213838 | 34213888 | E072 | 25991 |
| chr11 | 34214041 | 34215051 | E072 | 26194 |
| chr11 | 34227981 | 34228991 | E072 | 40134 |
| chr11 | 34229084 | 34229172 | E072 | 41237 |
| chr11 | 34229227 | 34229298 | E072 | 41380 |
| chr11 | 34176606 | 34177034 | E073 | -10813 |
| chr11 | 34177069 | 34177205 | E073 | -10642 |
| chr11 | 34177293 | 34177589 | E073 | -10258 |
| chr11 | 34178754 | 34178820 | E073 | -9027 |
| chr11 | 34178833 | 34178913 | E073 | -8934 |
| chr11 | 34179064 | 34179139 | E073 | -8708 |
| chr11 | 34197880 | 34198103 | E073 | 10033 |
| chr11 | 34198107 | 34198420 | E073 | 10260 |
| chr11 | 34198449 | 34198561 | E073 | 10602 |
| chr11 | 34198611 | 34198809 | E073 | 10764 |
| chr11 | 34200752 | 34201043 | E073 | 12905 |
| chr11 | 34201288 | 34201338 | E073 | 13441 |
| chr11 | 34201638 | 34202215 | E073 | 13791 |
| chr11 | 34202222 | 34202352 | E073 | 14375 |
| chr11 | 34202353 | 34202403 | E073 | 14506 |
| chr11 | 34202471 | 34203214 | E073 | 14624 |
| chr11 | 34203265 | 34203305 | E073 | 15418 |
| chr11 | 34205136 | 34205180 | E073 | 17289 |
| chr11 | 34205189 | 34205239 | E073 | 17342 |
| chr11 | 34205948 | 34206106 | E073 | 18101 |
| chr11 | 34206157 | 34206207 | E073 | 18310 |
| chr11 | 34207560 | 34207708 | E073 | 19713 |
| chr11 | 34207768 | 34208588 | E073 | 19921 |
| chr11 | 34213254 | 34213480 | E073 | 25407 |
| chr11 | 34213506 | 34213566 | E073 | 25659 |
| chr11 | 34213749 | 34213803 | E073 | 25902 |
| chr11 | 34213838 | 34213888 | E073 | 25991 |
| chr11 | 34214041 | 34215051 | E073 | 26194 |
| chr11 | 34176606 | 34177034 | E074 | -10813 |
| chr11 | 34177069 | 34177205 | E074 | -10642 |
| chr11 | 34177293 | 34177589 | E074 | -10258 |
| chr11 | 34177718 | 34177823 | E074 | -10024 |
| chr11 | 34187447 | 34188169 | E074 | 0 |
| chr11 | 34188196 | 34188259 | E074 | 349 |
| chr11 | 34195224 | 34195387 | E074 | 7377 |
| chr11 | 34197880 | 34198103 | E074 | 10033 |
| chr11 | 34198107 | 34198420 | E074 | 10260 |
| chr11 | 34198449 | 34198561 | E074 | 10602 |
| chr11 | 34198611 | 34198809 | E074 | 10764 |
| chr11 | 34199076 | 34199173 | E074 | 11229 |
| chr11 | 34199438 | 34199562 | E074 | 11591 |
| chr11 | 34199944 | 34200058 | E074 | 12097 |
| chr11 | 34200152 | 34200281 | E074 | 12305 |
| chr11 | 34200381 | 34200431 | E074 | 12534 |
| chr11 | 34200752 | 34201043 | E074 | 12905 |
| chr11 | 34201288 | 34201338 | E074 | 13441 |
| chr11 | 34201638 | 34202215 | E074 | 13791 |
| chr11 | 34202222 | 34202352 | E074 | 14375 |
| chr11 | 34202353 | 34202403 | E074 | 14506 |
| chr11 | 34202471 | 34203214 | E074 | 14624 |
| chr11 | 34203265 | 34203305 | E074 | 15418 |
| chr11 | 34203684 | 34203764 | E074 | 15837 |
| chr11 | 34207560 | 34207708 | E074 | 19713 |
| chr11 | 34207768 | 34208588 | E074 | 19921 |
| chr11 | 34208705 | 34208755 | E074 | 20858 |
| chr11 | 34210239 | 34210454 | E074 | 22392 |
| chr11 | 34210459 | 34210518 | E074 | 22612 |
| chr11 | 34210587 | 34210723 | E074 | 22740 |
| chr11 | 34212921 | 34213047 | E074 | 25074 |
| chr11 | 34213178 | 34213228 | E074 | 25331 |
| chr11 | 34213254 | 34213480 | E074 | 25407 |
| chr11 | 34213506 | 34213566 | E074 | 25659 |
| chr11 | 34213749 | 34213803 | E074 | 25902 |
| chr11 | 34213838 | 34213888 | E074 | 25991 |
| chr11 | 34214041 | 34215051 | E074 | 26194 |
| chr11 | 34215149 | 34215281 | E074 | 27302 |
| chr11 | 34227229 | 34227541 | E074 | 39382 |
| chr11 | 34227981 | 34228991 | E074 | 40134 |
| chr11 | 34229084 | 34229172 | E074 | 41237 |
| chr11 | 34229227 | 34229298 | E074 | 41380 |
| chr11 | 34229479 | 34229701 | E074 | 41632 |
| chr11 | 34229711 | 34229775 | E074 | 41864 |
| chr11 | 34229920 | 34229997 | E074 | 42073 |
| chr11 | 34231457 | 34231703 | E074 | 43610 |
| chr11 | 34232092 | 34232142 | E074 | 44245 |
| chr11 | 34232254 | 34232304 | E074 | 44407 |
| chr11 | 34195465 | 34195657 | E081 | 7618 |
| chr11 | 34203684 | 34203764 | E081 | 15837 |
| chr11 | 34206968 | 34207272 | E081 | 19121 |
| chr11 | 34207560 | 34207708 | E081 | 19713 |
| chr11 | 34207768 | 34208588 | E081 | 19921 |
| chr11 | 34208705 | 34208755 | E081 | 20858 |
| chr11 | 34208816 | 34208876 | E081 | 20969 |
| chr11 | 34209665 | 34210191 | E081 | 21818 |
| chr11 | 34210239 | 34210454 | E081 | 22392 |
| chr11 | 34210459 | 34210518 | E081 | 22612 |
| chr11 | 34210587 | 34210723 | E081 | 22740 |
| chr11 | 34227981 | 34228991 | E081 | 40134 |
| chr11 | 34205948 | 34206106 | E082 | 18101 |
| chr11 | 34206157 | 34206207 | E082 | 18310 |
| chr11 | 34206238 | 34206309 | E082 | 18391 |
| chr11 | 34209665 | 34210191 | E082 | 21818 |
| chr11 | 34210239 | 34210454 | E082 | 22392 |
| chr11 | 34210459 | 34210518 | E082 | 22612 |
| chr11 | 34210587 | 34210723 | E082 | 22740 |
| chr11 | 34210879 | 34210992 | E082 | 23032 |
| chr11 | 34214041 | 34215051 | E082 | 26194 |
| chr11 | 34215149 | 34215281 | E082 | 27302 |
| chr11 | 34215391 | 34215543 | E082 | 27544 |