rs7563391

Homo sapiens
G>C
C2orf88 : Intron Variant
LOC105373795 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
C=0152 (4578/29936,GnomAD)
C=0147 (4296/29118,TOPMED)
C=0118 (590/5008,1000G)
C=0184 (710/3854,ALSPAC)
C=0179 (663/3708,TWINSUK)
chr2:189915077 (GRCh38.p7) (2q32.2)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 2NC_000002.12:g.189915077G>C
GRCh37.p13 chr 2NC_000002.11:g.190779803G>C

Gene: C2orf88, chromosome 2 open reading frame 88(plus strand)

Molecule type Change Amino acid[Codon] SO Term
C2orf88 transcript variant 1NM_001042519.1:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant 3NM_001042520.1:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant 2NM_001042521.1:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant 4NM_032321.2:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant X1XM_005246905.1:c.N/AIntron Variant
C2orf88 transcript variant X2XM_011511982.1:c.N/AIntron Variant
C2orf88 transcript variant X6XM_011511986.2:c.N/AIntron Variant
C2orf88 transcript variant X7XM_006712795.2:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant X3XM_011511983.1:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant X4XM_011511984.2:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant X5XM_011511985.2:c.N/AGenic Upstream Transcript Variant
C2orf88 transcript variant X7XM_017005096.1:c.N/AGenic Upstream Transcript Variant

Gene: LOC105373795, uncharacterized LOC105373795(minus strand)

Molecule type Change Amino acid[Codon] SO Term
LOC105373795 transcriptXR_923695.1:n.N/AIntron Variant

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.