rs7570901

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0457 (13654/29866,GnomAD)
G=0433 (12620/29116,TOPMED)
A==0498 (2496/5008,1000G)
G=0440 (1694/3854,ALSPAC)
G=0438 (1625/3708,TWINSUK)
chr2:20661447 (GRCh38.p7) (2p24.1)
CD
GWASdb2
1   publication(s)
See rs on genome

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 2NC_000002.12:g.20661447A>G
GRCh37.p13 chr 2NC_000002.11:g.20861207A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.573G=0.427
1000GenomesAmericanSub694A=0.430G=0.570
1000GenomesEast AsianSub1008A=0.423G=0.577
1000GenomesEuropeSub1006A=0.569G=0.431
1000GenomesGlobalStudy-wide5008A=0.498G=0.502
1000GenomesSouth AsianSub978A=0.450G=0.550
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.560G=0.440
The Genome Aggregation DatabaseAfricanSub8686A=0.570G=0.430
The Genome Aggregation DatabaseAmericanSub836A=0.410G=0.590
The Genome Aggregation DatabaseEast AsianSub1608A=0.397G=0.603
The Genome Aggregation DatabaseEuropeSub18436A=0.547G=0.452
The Genome Aggregation DatabaseGlobalStudy-wide29866A=0.542G=0.457
The Genome Aggregation DatabaseOtherSub300A=0.600G=0.400
Trans-Omics for Precision MedicineGlobalStudy-wide29116A=0.566G=0.433
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.562G=0.438
PMID Title Author Journal
23958962Genome-wide association study of cocaine dependence and related traits: FAM53B identified as a risk gene.Gelernter JMol Psychiatry

P-Value

SNP ID p-value Traits Study
rs75709010.000202cocaine dependence23958962

eQTL of rs7570901 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7570901 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr22081156920811750E067-49457
chr22081264020812704E067-48503
chr22081274620812936E067-48271
chr22081302520813309E067-47898
chr22081338420813443E067-47764
chr22081347720813766E067-47441
chr22081389420813944E067-47263
chr22081400320814205E067-47002
chr22081426320814357E067-46850
chr22081441120814886E067-46321
chr22081499820815065E067-46142
chr22081531820816116E067-45091
chr22081614420816202E067-45005
chr22081620720816283E067-44924
chr22081634720816398E067-44809
chr22081646920816552E067-44655
chr22081665920816814E067-44393
chr22081684520818581E067-42626
chr22081863620818783E067-42424
chr22081882220818897E067-42310
chr22081894820819064E067-42143
chr22081957820819647E067-41560
chr22081984520819961E067-41246
chr22082029120820422E067-40785
chr22082076020820855E067-40352
chr22082099920821050E067-40157
chr22082126120821318E067-39889
chr22082470020824754E067-36453
chr22082539520825456E067-35751
chr22082547620825653E067-35554
chr22082571320825879E067-35328
chr22082603220826201E067-35006
chr22082678820826919E067-34288
chr22082696320827015E067-34192
chr22082842420828509E067-32698
chr22082875520828877E067-32330
chr22082899920829080E067-32127
chr22082913720829213E067-31994
chr22082926720829983E067-31224
chr22083420820834495E067-26712
chr22083452020834719E067-26488
chr22083499520835171E067-26036
chr22083528420836106E067-25101
chr22083619420836244E067-24963
chr22084081620840935E067-20272
chr22084124220841737E067-19470
chr22084183020842649E067-18558
chr22084271420842764E067-18443
chr22084290820842992E067-18215
chr22084704720847119E067-14088
chr22084727520847327E067-13880
chr22084735120847401E067-13806
chr22084754920847673E067-13534
chr22084772620847868E067-13339
chr22084788720848374E067-12833
chr22084922820849719E067-11488
chr22081156920811750E068-49457
chr22081190820812015E068-49192
chr22081217020812254E068-48953
chr22081237520812421E068-48786
chr22081244820812521E068-48686
chr22081264020812704E068-48503
chr22081274620812936E068-48271
chr22081302520813309E068-47898
chr22081338420813443E068-47764
chr22081347720813766E068-47441
chr22081389420813944E068-47263
chr22081400320814205E068-47002
chr22081426320814357E068-46850
chr22081441120814886E068-46321
chr22081499820815065E068-46142
chr22081531820816116E068-45091
chr22081614420816202E068-45005
chr22081620720816283E068-44924
chr22081634720816398E068-44809
chr22081646920816552E068-44655
chr22081665920816814E068-44393
chr22081684520818581E068-42626
chr22081863620818783E068-42424
chr22081882220818897E068-42310
chr22081894820819064E068-42143
chr22081921420819569E068-41638
chr22081957820819647E068-41560
chr22081984520819961E068-41246
chr22082029120820422E068-40785
chr22082076020820855E068-40352
chr22082099920821050E068-40157
chr22082470020824754E068-36453
chr22082539520825456E068-35751
chr22082547620825653E068-35554
chr22082571320825879E068-35328
chr22082603220826201E068-35006
chr22082678820826919E068-34288
chr22082696320827015E068-34192
chr22082705720827140E068-34067
chr22082721520827298E068-33909
chr22082738220827458E068-33749
chr22082875520828877E068-32330
chr22082899920829080E068-32127
chr22082913720829213E068-31994
chr22082926720829983E068-31224
chr22083420820834495E068-26712
chr22083452020834719E068-26488
chr22083499520835171E068-26036
chr22083528420836106E068-25101
chr22084050620840712E068-20495
chr22084073120840802E068-20405
chr22084081620840935E068-20272
chr22084124220841737E068-19470
chr22084183020842649E068-18558
chr22084271420842764E068-18443
chr22084290820842992E068-18215
chr22084638420846454E068-14753
chr22084671020846754E068-14453
chr22084704720847119E068-14088
chr22084727520847327E068-13880
chr22084735120847401E068-13806
chr22084754920847673E068-13534
chr22084772620847868E068-13339
chr22084788720848374E068-12833
chr22081264020812704E069-48503
chr22081274620812936E069-48271
chr22081302520813309E069-47898
chr22081338420813443E069-47764
chr22081347720813766E069-47441
chr22081389420813944E069-47263
chr22081400320814205E069-47002
chr22081426320814357E069-46850
chr22081441120814886E069-46321
chr22081499820815065E069-46142
chr22081531820816116E069-45091
chr22081614420816202E069-45005
chr22081620720816283E069-44924
chr22081634720816398E069-44809
chr22081646920816552E069-44655
chr22081665920816814E069-44393
chr22081684520818581E069-42626
chr22081863620818783E069-42424
chr22081882220818897E069-42310
chr22081894820819064E069-42143
chr22081921420819569E069-41638
chr22081957820819647E069-41560
chr22081984520819961E069-41246
chr22082126120821318E069-39889
chr22082146620821516E069-39691
chr22082470020824754E069-36453
chr22082539520825456E069-35751
chr22082547620825653E069-35554
chr22082571320825879E069-35328
chr22082603220826201E069-35006
chr22082875520828877E069-32330
chr22082899920829080E069-32127
chr22082913720829213E069-31994
chr22082926720829983E069-31224
chr22083420820834495E069-26712
chr22083452020834719E069-26488
chr22083499520835171E069-26036
chr22083528420836106E069-25101
chr22083619420836244E069-24963
chr22083642720836477E069-24730
chr22083654220836586E069-24621
chr22084050620840712E069-20495
chr22084073120840802E069-20405
chr22084081620840935E069-20272
chr22084124220841737E069-19470
chr22084183020842649E069-18558
chr22084271420842764E069-18443
chr22084727520847327E069-13880
chr22084735120847401E069-13806
chr22084754920847673E069-13534
chr22084772620847868E069-13339
chr22084788720848374E069-12833
chr22081400320814205E070-47002
chr22081426320814357E070-46850
chr22081441120814886E070-46321
chr22081646920816552E070-44655
chr22081665920816814E070-44393
chr22081684520818581E070-42626
chr22082875520828877E070-32330
chr22082899920829080E070-32127
chr22082913720829213E070-31994
chr22082926720829983E070-31224
chr22083420820834495E070-26712
chr22083452020834719E070-26488
chr22083499520835171E070-26036
chr22083528420836106E070-25101
chr22081156920811750E071-49457
chr22081190820812015E071-49192
chr22081217020812254E071-48953
chr22081237520812421E071-48786
chr22081244820812521E071-48686
chr22081264020812704E071-48503
chr22081274620812936E071-48271
chr22081302520813309E071-47898
chr22081338420813443E071-47764
chr22081347720813766E071-47441
chr22081389420813944E071-47263
chr22081400320814205E071-47002
chr22081426320814357E071-46850
chr22081441120814886E071-46321
chr22081499820815065E071-46142
chr22081531820816116E071-45091
chr22081614420816202E071-45005
chr22081620720816283E071-44924
chr22081634720816398E071-44809
chr22081646920816552E071-44655
chr22081665920816814E071-44393
chr22081684520818581E071-42626
chr22081863620818783E071-42424
chr22081882220818897E071-42310
chr22081894820819064E071-42143
chr22081921420819569E071-41638
chr22081957820819647E071-41560
chr22081984520819961E071-41246
chr22082029120820422E071-40785
chr22082470020824754E071-36453
chr22082539520825456E071-35751
chr22082547620825653E071-35554
chr22082571320825879E071-35328
chr22082603220826201E071-35006
chr22082678820826919E071-34288
chr22082696320827015E071-34192
chr22082705720827140E071-34067
chr22082875520828877E071-32330
chr22082899920829080E071-32127
chr22082913720829213E071-31994
chr22082926720829983E071-31224
chr22083352320834200E071-27007
chr22083420820834495E071-26712
chr22083452020834719E071-26488
chr22083499520835171E071-26036
chr22083528420836106E071-25101
chr22083619420836244E071-24963
chr22083642720836477E071-24730
chr22083654220836586E071-24621
chr22083686420837201E071-24006
chr22084073120840802E071-20405
chr22084081620840935E071-20272
chr22084124220841737E071-19470
chr22084183020842649E071-18558
chr22084271420842764E071-18443
chr22084290820842992E071-18215
chr22084704720847119E071-14088
chr22084772620847868E071-13339
chr22084788720848374E071-12833
chr22085166520851751E071-9456
chr22081156920811750E072-49457
chr22081237520812421E072-48786
chr22081244820812521E072-48686
chr22081264020812704E072-48503
chr22081274620812936E072-48271
chr22081302520813309E072-47898
chr22081338420813443E072-47764
chr22081347720813766E072-47441
chr22081389420813944E072-47263
chr22081400320814205E072-47002
chr22081426320814357E072-46850
chr22081441120814886E072-46321
chr22081499820815065E072-46142
chr22081531820816116E072-45091
chr22081614420816202E072-45005
chr22081620720816283E072-44924
chr22081634720816398E072-44809
chr22081646920816552E072-44655
chr22081665920816814E072-44393
chr22081684520818581E072-42626
chr22081863620818783E072-42424
chr22081882220818897E072-42310
chr22081894820819064E072-42143
chr22081921420819569E072-41638
chr22081957820819647E072-41560
chr22081984520819961E072-41246
chr22082029120820422E072-40785
chr22082076020820855E072-40352
chr22082539520825456E072-35751
chr22082547620825653E072-35554
chr22082571320825879E072-35328
chr22082603220826201E072-35006
chr22082678820826919E072-34288
chr22082696320827015E072-34192
chr22082705720827140E072-34067
chr22082721520827298E072-33909
chr22082738220827458E072-33749
chr22082842420828509E072-32698
chr22082875520828877E072-32330
chr22082899920829080E072-32127
chr22082913720829213E072-31994
chr22082926720829983E072-31224
chr22083352320834200E072-27007
chr22083420820834495E072-26712
chr22083452020834719E072-26488
chr22083499520835171E072-26036
chr22083528420836106E072-25101
chr22083619420836244E072-24963
chr22084073120840802E072-20405
chr22084081620840935E072-20272
chr22084124220841737E072-19470
chr22084183020842649E072-18558
chr22084271420842764E072-18443
chr22084290820842992E072-18215
chr22084754920847673E072-13534
chr22084772620847868E072-13339
chr22084788720848374E072-12833
chr22081156920811750E073-49457
chr22081190820812015E073-49192
chr22081217020812254E073-48953
chr22081237520812421E073-48786
chr22081244820812521E073-48686
chr22081264020812704E073-48503
chr22081274620812936E073-48271
chr22081302520813309E073-47898
chr22081338420813443E073-47764
chr22081347720813766E073-47441
chr22081389420813944E073-47263
chr22081400320814205E073-47002
chr22081441120814886E073-46321
chr22081499820815065E073-46142
chr22081531820816116E073-45091
chr22081665920816814E073-44393
chr22081684520818581E073-42626
chr22081863620818783E073-42424
chr22081882220818897E073-42310
chr22081894820819064E073-42143
chr22081921420819569E073-41638
chr22081957820819647E073-41560
chr22081984520819961E073-41246
chr22082029120820422E073-40785
chr22082539520825456E073-35751
chr22082547620825653E073-35554
chr22082571320825879E073-35328
chr22082603220826201E073-35006
chr22082678820826919E073-34288
chr22082696320827015E073-34192
chr22082705720827140E073-34067
chr22082721520827298E073-33909
chr22082913720829213E073-31994
chr22082926720829983E073-31224
chr22083352320834200E073-27007
chr22083420820834495E073-26712
chr22083452020834719E073-26488
chr22083499520835171E073-26036
chr22083528420836106E073-25101
chr22083619420836244E073-24963
chr22084050620840712E073-20495
chr22084073120840802E073-20405
chr22084081620840935E073-20272
chr22084124220841737E073-19470
chr22084183020842649E073-18558
chr22084271420842764E073-18443
chr22084290820842992E073-18215
chr22084735120847401E073-13806
chr22084754920847673E073-13534
chr22084772620847868E073-13339
chr22084788720848374E073-12833
chr22087477520875102E07313568
chr22081156920811750E074-49457
chr22081190820812015E074-49192
chr22081217020812254E074-48953
chr22081237520812421E074-48786
chr22081244820812521E074-48686
chr22081264020812704E074-48503
chr22081274620812936E074-48271
chr22081302520813309E074-47898
chr22081338420813443E074-47764
chr22081347720813766E074-47441
chr22081389420813944E074-47263
chr22081400320814205E074-47002
chr22081426320814357E074-46850
chr22081441120814886E074-46321
chr22081499820815065E074-46142
chr22081531820816116E074-45091
chr22081614420816202E074-45005
chr22081620720816283E074-44924
chr22081634720816398E074-44809
chr22081646920816552E074-44655
chr22081665920816814E074-44393
chr22081684520818581E074-42626
chr22081863620818783E074-42424
chr22081882220818897E074-42310
chr22081894820819064E074-42143
chr22081921420819569E074-41638
chr22081957820819647E074-41560
chr22082126120821318E074-39889
chr22082146620821516E074-39691
chr22082160520821689E074-39518
chr22082470020824754E074-36453
chr22082539520825456E074-35751
chr22082547620825653E074-35554
chr22082571320825879E074-35328
chr22082603220826201E074-35006
chr22082678820826919E074-34288
chr22082842420828509E074-32698
chr22082875520828877E074-32330
chr22082899920829080E074-32127
chr22082913720829213E074-31994
chr22082926720829983E074-31224
chr22083420820834495E074-26712
chr22083452020834719E074-26488
chr22083499520835171E074-26036
chr22083528420836106E074-25101
chr22083619420836244E074-24963
chr22083642720836477E074-24730
chr22083654220836586E074-24621
chr22084050620840712E074-20495
chr22084073120840802E074-20405
chr22084081620840935E074-20272
chr22084124220841737E074-19470
chr22084183020842649E074-18558
chr22084271420842764E074-18443
chr22084290820842992E074-18215
chr22084727520847327E074-13880
chr22084735120847401E074-13806
chr22084754920847673E074-13534
chr22084772620847868E074-13339
chr22084788720848374E074-12833
chr22084922820849719E074-11488
chr22085166520851751E074-9456
chr22081264020812704E081-48503
chr22081274620812936E081-48271
chr22081302520813309E081-47898
chr22081665920816814E081-44393
chr22081684520818581E081-42626
chr22082875520828877E081-32330
chr22082899920829080E081-32127
chr22082913720829213E081-31994
chr22082926720829983E081-31224
chr22083352320834200E081-27007
chr22083420820834495E081-26712
chr22083452020834719E081-26488
chr22083499520835171E081-26036
chr22083528420836106E081-25101
chr22083619420836244E081-24963
chr22084183020842649E081-18558
chr22084922820849719E081-11488
chr22085166520851751E081-9456
chr22087765920877715E08116452
chr22081264020812704E082-48503
chr22081274620812936E082-48271
chr22081302520813309E082-47898
chr22081338420813443E082-47764
chr22081347720813766E082-47441
chr22081665920816814E082-44393
chr22082255320822871E082-38336
chr22082307120823179E082-38028
chr22082913720829213E082-31994
chr22082926720829983E082-31224
chr22083420820834495E082-26712
chr22083452020834719E082-26488
chr22083499520835171E082-26036
chr22084922820849719E082-11488










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr22084972020851657E067-9550
chr22086541720867107E0674210
chr22086719620867724E0675989
chr22084972020851657E068-9550
chr22086541720867107E0684210
chr22086719620867724E0685989
chr22084972020851657E069-9550
chr22086541720867107E0694210
chr22086719620867724E0695989
chr22086779820867858E0696591
chr22084972020851657E070-9550
chr22086719620867724E0705989
chr22084972020851657E071-9550
chr22086719620867724E0715989
chr22086779820867858E0716591
chr22084972020851657E072-9550
chr22084972020851657E073-9550
chr22086719620867724E0735989
chr22084972020851657E074-9550
chr22084972020851657E081-9550
chr22084972020851657E082-9550
chr22086541720867107E0824210
chr22086719620867724E0825989