Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 2 | NC_000002.12:g.207637006A>G |
GRCh37.p13 chr 2 | NC_000002.11:g.208501730A>G |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | A=0.488 | G=0.512 |
1000Genomes | American | Sub | 694 | A=0.540 | G=0.460 |
1000Genomes | East Asian | Sub | 1008 | A=0.406 | G=0.594 |
1000Genomes | Europe | Sub | 1006 | A=0.529 | G=0.471 |
1000Genomes | Global | Study-wide | 5008 | A=0.500 | G=0.500 |
1000Genomes | South Asian | Sub | 978 | A=0.560 | G=0.440 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.549 | G=0.451 |
The Genome Aggregation Database | African | Sub | 8634 | A=0.482 | G=0.518 |
The Genome Aggregation Database | American | Sub | 830 | A=0.560 | G=0.440 |
The Genome Aggregation Database | East Asian | Sub | 1572 | A=0.416 | G=0.584 |
The Genome Aggregation Database | Europe | Sub | 18348 | A=0.556 | G=0.443 |
The Genome Aggregation Database | Global | Study-wide | 29686 | A=0.526 | G=0.473 |
The Genome Aggregation Database | Other | Sub | 302 | A=0.490 | G=0.510 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.513 | G=0.486 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.553 | G=0.447 |
PMID | Title | Author | Journal |
---|---|---|---|
23183491 | Genome-wide association study identifies a potent locus associated with human opioid sensitivity. | Nishizawa D | Mol Psychiatry |
26736037 | Single nucleotide polymorphism near CREB1, rs7591784, is associated with pretreatment methamphetamine use frequency and outcome of outpatient treatment for methamphetamine use disorder. | Heinzerling KG | J Psychiatr Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs7591784 | 1.06E-06 | Opioid sensitivity | 23183491 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr2 | 208467556 | 208467656 | E067 | -34074 |
chr2 | 208467955 | 208468204 | E067 | -33526 |
chr2 | 208468345 | 208468451 | E067 | -33279 |
chr2 | 208467955 | 208468204 | E068 | -33526 |
chr2 | 208468345 | 208468451 | E068 | -33279 |
chr2 | 208467556 | 208467656 | E069 | -34074 |
chr2 | 208467955 | 208468204 | E069 | -33526 |
chr2 | 208468345 | 208468451 | E069 | -33279 |
chr2 | 208528918 | 208529061 | E070 | 27188 |
chr2 | 208530054 | 208530175 | E070 | 28324 |
chr2 | 208530194 | 208530330 | E070 | 28464 |
chr2 | 208468345 | 208468451 | E071 | -33279 |
chr2 | 208477393 | 208477872 | E071 | -23858 |
chr2 | 208467556 | 208467656 | E072 | -34074 |
chr2 | 208467955 | 208468204 | E072 | -33526 |
chr2 | 208468345 | 208468451 | E072 | -33279 |
chr2 | 208477393 | 208477872 | E072 | -23858 |
chr2 | 208482460 | 208482572 | E072 | -19158 |
chr2 | 208486395 | 208486519 | E073 | -15211 |
chr2 | 208487298 | 208487338 | E073 | -14392 |
chr2 | 208491753 | 208492513 | E073 | -9217 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr2 | 208488612 | 208488838 | E067 | -12892 |
chr2 | 208488906 | 208491332 | E067 | -10398 |
chr2 | 208488612 | 208488838 | E068 | -12892 |
chr2 | 208488906 | 208491332 | E068 | -10398 |
chr2 | 208491433 | 208491516 | E068 | -10214 |
chr2 | 208491536 | 208491597 | E068 | -10133 |
chr2 | 208491630 | 208491681 | E068 | -10049 |
chr2 | 208488612 | 208488838 | E069 | -12892 |
chr2 | 208488906 | 208491332 | E069 | -10398 |
chr2 | 208488612 | 208488838 | E070 | -12892 |
chr2 | 208488906 | 208491332 | E070 | -10398 |
chr2 | 208488612 | 208488838 | E071 | -12892 |
chr2 | 208488906 | 208491332 | E071 | -10398 |
chr2 | 208491433 | 208491516 | E071 | -10214 |
chr2 | 208491536 | 208491597 | E071 | -10133 |
chr2 | 208491630 | 208491681 | E071 | -10049 |
chr2 | 208488612 | 208488838 | E072 | -12892 |
chr2 | 208488906 | 208491332 | E072 | -10398 |
chr2 | 208488612 | 208488838 | E073 | -12892 |
chr2 | 208488906 | 208491332 | E073 | -10398 |
chr2 | 208488612 | 208488838 | E074 | -12892 |
chr2 | 208488906 | 208491332 | E074 | -10398 |
chr2 | 208488906 | 208491332 | E081 | -10398 |
chr2 | 208488612 | 208488838 | E082 | -12892 |
chr2 | 208488906 | 208491332 | E082 | -10398 |
chr2 | 208491433 | 208491516 | E082 | -10214 |
chr2 | 208491536 | 208491597 | E082 | -10133 |