rs7615501

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
G==0277 (8297/29910,GnomAD)
G==0207 (6044/29118,TOPMED)
G==0221 (1109/5008,1000G)
G==0363 (1400/3854,ALSPAC)
G==0387 (1434/3708,TWINSUK)
chr3:53141541 (GRCh38.p7) (3p21.1)
AD
GWASdb2
1   publication(s)
See rs on genome
149 Enhancers around
19 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.53141541G>A
GRCh37.p13 chr 3NC_000003.11:g.53175557G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.053A=0.947
1000GenomesAmericanSub694G=0.190A=0.810
1000GenomesEast AsianSub1008G=0.230A=0.770
1000GenomesEuropeSub1006G=0.376A=0.624
1000GenomesGlobalStudy-wide5008G=0.221A=0.779
1000GenomesSouth AsianSub978G=0.300A=0.700
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.363A=0.637
The Genome Aggregation DatabaseAfricanSub8706G=0.096A=0.904
The Genome Aggregation DatabaseAmericanSub834G=0.150A=0.850
The Genome Aggregation DatabaseEast AsianSub1614G=0.270A=0.730
The Genome Aggregation DatabaseEuropeSub18456G=0.368A=0.631
The Genome Aggregation DatabaseGlobalStudy-wide29910G=0.277A=0.722
The Genome Aggregation DatabaseOtherSub300G=0.320A=0.680
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.207A=0.792
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.387A=0.613
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs76155010.000823alcohol dependence20201924

eQTL of rs7615501 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7615501 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr35316283953163017E067-12540
chr35316304553163129E067-12428
chr35316315753163446E067-12111
chr35316528053165481E067-10076
chr35319412453194388E06718567
chr35320049353200582E06724936
chr35320061053200681E06725053
chr35320421153204953E06728654
chr35320497353205362E06729416
chr35316528053165481E068-10076
chr35318765853187782E06812101
chr35318784153187903E06812284
chr35318811553188179E06812558
chr35318891853189074E06813361
chr35318914753189399E06813590
chr35318970153190210E06814144
chr35319179053191953E06816233
chr35319229553192445E06816738
chr35319248853192674E06816931
chr35319790353197969E06822346
chr35319820753198292E06822650
chr35319885653199065E06823299
chr35319907253199211E06823515
chr35319927753199327E06823720
chr35320049353200582E06824936
chr35320061053200681E06825053
chr35320085753200933E06825300
chr35320093553201295E06825378
chr35320130353201544E06825746
chr35320157853201751E06826021
chr35320191453202228E06826357
chr35320228453202462E06826727
chr35320258553202723E06827028
chr35320421153204953E06828654
chr35320497353205362E06829416
chr35320943653209490E06833879
chr35321034153210470E06834784
chr35316283953163017E069-12540
chr35316304553163129E069-12428
chr35316315753163446E069-12111
chr35316528053165481E069-10076
chr35318811553188179E06912558
chr35319131653191582E06915759
chr35319179053191953E06916233
chr35319229553192445E06916738
chr35319248853192674E06916931
chr35319284653193010E06917289
chr35319302253194038E06917465
chr35319412453194388E06918567
chr35320061053200681E06925053
chr35320085753200933E06925300
chr35320421153204953E06928654
chr35320497353205362E06929416
chr35316315753163446E070-12111
chr35320049353200582E07024936
chr35320061053200681E07025053
chr35320085753200933E07025300
chr35320093553201295E07025378
chr35320130353201544E07025746
chr35320157853201751E07026021
chr35320228453202462E07026727
chr35320258553202723E07027028
chr35316283953163017E071-12540
chr35316304553163129E071-12428
chr35316315753163446E071-12111
chr35316528053165481E071-10076
chr35316858353169246E071-6311
chr35317486553175140E071-417
chr35318811553188179E07112558
chr35319131653191582E07115759
chr35319179053191953E07116233
chr35319229553192445E07116738
chr35319248853192674E07116931
chr35319284653193010E07117289
chr35319302253194038E07117465
chr35319885653199065E07123299
chr35319907253199211E07123515
chr35319927753199327E07123720
chr35320049353200582E07124936
chr35320061053200681E07125053
chr35320085753200933E07125300
chr35320093553201295E07125378
chr35320130353201544E07125746
chr35320157853201751E07126021
chr35320191453202228E07126357
chr35320497353205362E07129416
chr35320587053206311E07130313
chr35320637653206513E07130819
chr35320655253206647E07130995
chr35320674653206809E07131189
chr35312839453128643E072-46914
chr35316528053165481E072-10076
chr35316840453168466E072-7091
chr35316847653168516E072-7041
chr35316858353169246E072-6311
chr35318765853187782E07212101
chr35318784153187903E07212284
chr35318811553188179E07212558
chr35318970153190210E07214144
chr35319131653191582E07215759
chr35319412453194388E07218567
chr35320049353200582E07224936
chr35320061053200681E07225053
chr35320085753200933E07225300
chr35320093553201295E07225378
chr35320130353201544E07225746
chr35320157853201751E07226021
chr35320497353205362E07229416
chr35320943653209490E07233879
chr35321034153210470E07234784
chr35316283953163017E073-12540
chr35316304553163129E073-12428
chr35316315753163446E073-12111
chr35316528053165481E073-10076
chr35317401453174692E073-865
chr35317486553175140E073-417
chr35318765853187782E07312101
chr35318784153187903E07312284
chr35318811553188179E07312558
chr35318891853189074E07313361
chr35318914753189399E07313590
chr35319284653193010E07317289
chr35319302253194038E07317465
chr35320049353200582E07324936
chr35320061053200681E07325053
chr35320085753200933E07325300
chr35320093553201295E07325378
chr35320130353201544E07325746
chr35320157853201751E07326021
chr35320191453202228E07326357
chr35320228453202462E07326727
chr35320497353205362E07329416
chr35320587053206311E07330313
chr35320637653206513E07330819
chr35316315753163446E074-12111
chr35316528053165481E074-10076
chr35317401453174692E074-865
chr35318970153190210E07414144
chr35319302253194038E07417465
chr35319412453194388E07418567
chr35320228453202462E07426727
chr35320258553202723E07427028
chr35320497353205362E07429416
chr35321408353214127E07438526
chr35321433953214389E07438782
chr35321445153214591E07438894
chr35314620553146298E081-29259
chr35320049353200582E08124936
chr35320497353205362E08129416









Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr35316384853165196E067-10361
chr35319439653196291E06718839
chr35316384853165196E068-10361
chr35319439653196291E06818839
chr35316384853165196E069-10361
chr35319439653196291E06918839
chr35316384853165196E070-10361
chr35319439653196291E07018839
chr35316384853165196E071-10361
chr35319439653196291E07118839
chr35316384853165196E072-10361
chr35319439653196291E07218839
chr35316384853165196E073-10361
chr35319439653196291E07318839
chr35316384853165196E074-10361
chr35319439653196291E07418839
chr35316384853165196E081-10361
chr35316384853165196E082-10361
chr35319439653196291E08218839