rs7620363

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0246 (7370/29944,GnomAD)
T=0210 (6138/29118,TOPMED)
T=0251 (1256/5008,1000G)
T=0372 (1433/3854,ALSPAC)
T=0351 (1303/3708,TWINSUK)
chr3:33971713 (GRCh38.p7) (3p22.3)
AD | ND
GWASdb2
1   publication(s)
See rs on genome
28 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.33971713C>T
GRCh37.p13 chr 3NC_000003.11:g.34013205C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.979T=0.021
1000GenomesAmericanSub694C=0.700T=0.300
1000GenomesEast AsianSub1008C=0.732T=0.268
1000GenomesEuropeSub1006C=0.667T=0.333
1000GenomesGlobalStudy-wide5008C=0.749T=0.251
1000GenomesSouth AsianSub978C=0.580T=0.420
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.628T=0.372
The Genome Aggregation DatabaseAfricanSub8726C=0.935T=0.065
The Genome Aggregation DatabaseAmericanSub838C=0.680T=0.320
The Genome Aggregation DatabaseEast AsianSub1614C=0.727T=0.273
The Genome Aggregation DatabaseEuropeSub18464C=0.676T=0.323
The Genome Aggregation DatabaseGlobalStudy-wide29944C=0.753T=0.246
The Genome Aggregation DatabaseOtherSub302C=0.580T=0.420
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.789T=0.210
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.649T=0.351
PMID Title Author Journal
23942779A genome-wide association study of behavioral disinhibition.McGue MBehav Genet

P-Value

SNP ID p-value Traits Study
rs76203630.00046nicotine use23942779
rs76203630.00071alcohol consumption23942779

eQTL of rs7620363 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7620363 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr33397867133979241E070-33964
chr33397928233979407E070-33798
chr33397957233979711E070-33494
chr33398239633982501E070-30704
chr33398265433982712E070-30493
chr33398348133983532E070-29673
chr33398414733984311E070-28894
chr33398441633984542E070-28663
chr33398414733984311E071-28894
chr33398441633984542E071-28663
chr33405322134053339E08140016
chr33405339334053916E08140188
chr33405484534055044E08141640
chr33405548834056234E08142283
chr33405705634057268E08143851
chr33405738934057509E08144184
chr33405756334057617E08144358
chr33405822434058336E08145019
chr33405837134058973E08145166
chr33406208734062137E08148882
chr33406219134062455E08148986
chr33397848833978607E082-34598
chr33397867133979241E082-33964
chr33405484534055044E08241640
chr33405548834056234E08242283
chr33405837134058973E08245166
chr33406208734062137E08248882
chr33406219134062455E08248986