rs765805

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0193 (5780/29950,GnomAD)
T=0187 (5464/29118,TOPMED)
T=0160 (800/5008,1000G)
T=0222 (854/3854,ALSPAC)
T=0222 (822/3708,TWINSUK)
chr7:10429907 (GRCh38.p7) (7p21.3)
AD
GWASdb2
1   publication(s)
See rs on genome
25 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 7NC_000007.14:g.10429907C>T
GRCh37.p13 chr 7NC_000007.13:g.10469534C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.842T=0.158
1000GenomesAmericanSub694C=0.730T=0.270
1000GenomesEast AsianSub1008C=0.952T=0.048
1000GenomesEuropeSub1006C=0.783T=0.217
1000GenomesGlobalStudy-wide5008C=0.840T=0.160
1000GenomesSouth AsianSub978C=0.860T=0.140
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.778T=0.222
The Genome Aggregation DatabaseAfricanSub8708C=0.847T=0.153
The Genome Aggregation DatabaseAmericanSub838C=0.730T=0.270
The Genome Aggregation DatabaseEast AsianSub1616C=0.968T=0.032
The Genome Aggregation DatabaseEuropeSub18486C=0.778T=0.221
The Genome Aggregation DatabaseGlobalStudy-wide29950C=0.807T=0.193
The Genome Aggregation DatabaseOtherSub302C=0.760T=0.240
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.812T=0.187
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.778T=0.222
PMID Title Author Journal
21529783A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.Heath ACBiol Psychiatry

P-Value

SNP ID p-value Traits Study
rs7658056.4E-05alcoholism (heaviness of drinking)21529783

eQTL of rs765805 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs765805 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr71046881410468874E069-660
chr71046896210469097E069-437
chr71046920110469556E0690
chr71046975510469883E069221
chr71047002210470072E069488
chr71051757710517627E06948043
chr71046834710468446E070-1088
chr71046868210468722E070-812
chr71046881410468874E070-660
chr71046896210469097E070-437
chr71046920110469556E0700
chr71046975510469883E070221
chr71046834710468446E071-1088
chr71046868210468722E071-812
chr71046881410468874E071-660
chr71046896210469097E071-437
chr71046920110469556E0710
chr71046975510469883E071221
chr71047002210470072E071488
chr71046920110469556E0720
chr71046881410468874E074-660
chr71046896210469097E074-437
chr71046920110469556E0740
chr71046975510469883E074221
chr71047002210470072E074488