SNP Detail Info-rs7715848

Organism: Homo sapiens

Alleles: C>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

G=0169 (5071/29932,GnomAD)
G=0174 (5066/29118,TOPMED)
G=0174 (871/5008,1000G)
G=0175 (675/3854,ALSPAC)
G=0162 (600/3708,TWINSUK)

Position: chr5:156974467 (GRCh38.p7) (5q33.3)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 5	NC_000005.10:g.156974467C>G
GRCh37.p13 chr 5	NC_000005.9:g.156401478C>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	C=0.768	G=0.232
1000Genomes	American	Sub	694	C=0.850	G=0.150
1000Genomes	East Asian	Sub	1008	C=0.843	G=0.157
1000Genomes	Europe	Sub	1006	C=0.847	G=0.153
1000Genomes	Global	Study-wide	5008	C=0.826	G=0.174
1000Genomes	South Asian	Sub	978	C=0.850	G=0.150
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.825	G=0.175
The Genome Aggregation Database	African	Sub	8708	C=0.811	G=0.189
The Genome Aggregation Database	American	Sub	834	C=0.900	G=0.100
The Genome Aggregation Database	East Asian	Sub	1616	C=0.860	G=0.140
The Genome Aggregation Database	Europe	Sub	18472	C=0.835	G=0.164
The Genome Aggregation Database	Global	Study-wide	29932	C=0.830	G=0.169
The Genome Aggregation Database	Other	Sub	302	C=0.790	G=0.210
Trans-Omics for Precision Medicine	Global	Study-wide	29118	C=0.826	G=0.174
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.838	G=0.162

PMID	Title	Author	Journal
23743675	A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.	Kapoor M	Hum Genet

SNP ID	p-value	Traits	Study
rs7715848	1.36E-05	alcohol consumption	23743675

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs7715848