SNP Detail Info-rs7741833

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A==0443 (13263/29894,GnomAD)
A==0443 (12923/29118,TOPMED)
A==0454 (2275/5008,1000G)
A==0408 (1571/3854,ALSPAC)
A==0389 (1442/3708,TWINSUK)

Position: chr6:120679901 (GRCh38.p7) (6q22.31)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 1 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 6	NC_000006.12:g.120679901A>G
GRCh37.p13 chr 6	NC_000006.11:g.121001047A>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.510	G=0.490
1000Genomes	American	Sub	694	A=0.430	G=0.570
1000Genomes	East Asian	Sub	1008	A=0.475	G=0.525
1000Genomes	Europe	Sub	1006	A=0.410	G=0.590
1000Genomes	Global	Study-wide	5008	A=0.454	G=0.546
1000Genomes	South Asian	Sub	978	A=0.420	G=0.580
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.408	G=0.592
The Genome Aggregation Database	African	Sub	8704	A=0.482	G=0.518
The Genome Aggregation Database	American	Sub	838	A=0.380	G=0.620
The Genome Aggregation Database	East Asian	Sub	1614	A=0.453	G=0.547
The Genome Aggregation Database	Europe	Sub	18436	A=0.427	G=0.572
The Genome Aggregation Database	Global	Study-wide	29894	A=0.443	G=0.556
The Genome Aggregation Database	Other	Sub	302	A=0.420	G=0.580
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.443	G=0.556
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.389	G=0.611

PMID	Title	Author	Journal

SNP ID	p-value	Traits	Study
rs7741833	6.61E-06	alcohol consumption	pha001397

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs7741833