| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 6 | NC_000006.12:g.41452404A>C |
| GRCh37.p13 chr 6 | NC_000006.11:g.41420142A>C |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.936 | C=0.064 |
| 1000Genomes | American | Sub | 694 | A=0.960 | C=0.040 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.932 | C=0.068 |
| 1000Genomes | Europe | Sub | 1006 | A=0.949 | C=0.051 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.940 | C=0.060 |
| 1000Genomes | South Asian | Sub | 978 | A=0.930 | C=0.070 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.953 | C=0.047 |
| The Genome Aggregation Database | African | Sub | 8710 | A=0.929 | C=0.071 |
| The Genome Aggregation Database | American | Sub | 838 | A=0.970 | C=0.030 |
| The Genome Aggregation Database | East Asian | Sub | 1622 | A=0.948 | C=0.052 |
| The Genome Aggregation Database | Europe | Sub | 18466 | A=0.945 | C=0.054 |
| The Genome Aggregation Database | Global | Study-wide | 29938 | A=0.941 | C=0.058 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.940 | C=0.060 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.945 | C=0.054 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.961 | C=0.039 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs7765789 | 0.000904 | alcohol dependence | 20201924 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr6 | 41383524 | 41383722 | E067 | -36420 |
| chr6 | 41383990 | 41384204 | E067 | -35938 |
| chr6 | 41397490 | 41397752 | E067 | -22390 |
| chr6 | 41397887 | 41398057 | E067 | -22085 |
| chr6 | 41398396 | 41398531 | E067 | -21611 |
| chr6 | 41418607 | 41419813 | E067 | -329 |
| chr6 | 41462216 | 41462401 | E067 | 42074 |
| chr6 | 41462609 | 41462786 | E067 | 42467 |
| chr6 | 41383524 | 41383722 | E068 | -36420 |
| chr6 | 41383990 | 41384204 | E068 | -35938 |
| chr6 | 41384987 | 41385050 | E068 | -35092 |
| chr6 | 41397490 | 41397752 | E068 | -22390 |
| chr6 | 41397887 | 41398057 | E068 | -22085 |
| chr6 | 41398396 | 41398531 | E068 | -21611 |
| chr6 | 41410402 | 41412004 | E068 | -8138 |
| chr6 | 41418607 | 41419813 | E068 | -329 |
| chr6 | 41456034 | 41456703 | E068 | 35892 |
| chr6 | 41456733 | 41457025 | E068 | 36591 |
| chr6 | 41462216 | 41462401 | E068 | 42074 |
| chr6 | 41382928 | 41382978 | E069 | -37164 |
| chr6 | 41383524 | 41383722 | E069 | -36420 |
| chr6 | 41383990 | 41384204 | E069 | -35938 |
| chr6 | 41384987 | 41385050 | E069 | -35092 |
| chr6 | 41397490 | 41397752 | E069 | -22390 |
| chr6 | 41397887 | 41398057 | E069 | -22085 |
| chr6 | 41398396 | 41398531 | E069 | -21611 |
| chr6 | 41398742 | 41398897 | E069 | -21245 |
| chr6 | 41410402 | 41412004 | E069 | -8138 |
| chr6 | 41420638 | 41420782 | E069 | 496 |
| chr6 | 41420968 | 41421417 | E069 | 826 |
| chr6 | 41462216 | 41462401 | E069 | 42074 |
| chr6 | 41462609 | 41462786 | E069 | 42467 |
| chr6 | 41378203 | 41378253 | E070 | -41889 |
| chr6 | 41378478 | 41378541 | E070 | -41601 |
| chr6 | 41379051 | 41379131 | E070 | -41011 |
| chr6 | 41379807 | 41379894 | E070 | -40248 |
| chr6 | 41380426 | 41380621 | E070 | -39521 |
| chr6 | 41380963 | 41381057 | E070 | -39085 |
| chr6 | 41381094 | 41381307 | E070 | -38835 |
| chr6 | 41381554 | 41381709 | E070 | -38433 |
| chr6 | 41382928 | 41382978 | E070 | -37164 |
| chr6 | 41383524 | 41383722 | E070 | -36420 |
| chr6 | 41383990 | 41384204 | E070 | -35938 |
| chr6 | 41384987 | 41385050 | E070 | -35092 |
| chr6 | 41385292 | 41385731 | E070 | -34411 |
| chr6 | 41385775 | 41386007 | E070 | -34135 |
| chr6 | 41386172 | 41386222 | E070 | -33920 |
| chr6 | 41389963 | 41390279 | E070 | -29863 |
| chr6 | 41397887 | 41398057 | E070 | -22085 |
| chr6 | 41398396 | 41398531 | E070 | -21611 |
| chr6 | 41410402 | 41412004 | E070 | -8138 |
| chr6 | 41412407 | 41412560 | E070 | -7582 |
| chr6 | 41412660 | 41412756 | E070 | -7386 |
| chr6 | 41412869 | 41412927 | E070 | -7215 |
| chr6 | 41412933 | 41413396 | E070 | -6746 |
| chr6 | 41456034 | 41456703 | E070 | 35892 |
| chr6 | 41456733 | 41457025 | E070 | 36591 |
| chr6 | 41460444 | 41460503 | E070 | 40302 |
| chr6 | 41461567 | 41461617 | E070 | 41425 |
| chr6 | 41461923 | 41462180 | E070 | 41781 |
| chr6 | 41463270 | 41463320 | E070 | 43128 |
| chr6 | 41382928 | 41382978 | E071 | -37164 |
| chr6 | 41383524 | 41383722 | E071 | -36420 |
| chr6 | 41397490 | 41397752 | E071 | -22390 |
| chr6 | 41397887 | 41398057 | E071 | -22085 |
| chr6 | 41398396 | 41398531 | E071 | -21611 |
| chr6 | 41410402 | 41412004 | E071 | -8138 |
| chr6 | 41412117 | 41412230 | E071 | -7912 |
| chr6 | 41412407 | 41412560 | E071 | -7582 |
| chr6 | 41412660 | 41412756 | E071 | -7386 |
| chr6 | 41412869 | 41412927 | E071 | -7215 |
| chr6 | 41412933 | 41413396 | E071 | -6746 |
| chr6 | 41420093 | 41420174 | E071 | 0 |
| chr6 | 41420215 | 41420299 | E071 | 73 |
| chr6 | 41420638 | 41420782 | E071 | 496 |
| chr6 | 41420968 | 41421417 | E071 | 826 |
| chr6 | 41461923 | 41462180 | E071 | 41781 |
| chr6 | 41462216 | 41462401 | E071 | 42074 |
| chr6 | 41383524 | 41383722 | E072 | -36420 |
| chr6 | 41397490 | 41397752 | E072 | -22390 |
| chr6 | 41397887 | 41398057 | E072 | -22085 |
| chr6 | 41412407 | 41412560 | E072 | -7582 |
| chr6 | 41418607 | 41419813 | E072 | -329 |
| chr6 | 41462216 | 41462401 | E072 | 42074 |
| chr6 | 41382928 | 41382978 | E073 | -37164 |
| chr6 | 41397490 | 41397752 | E073 | -22390 |
| chr6 | 41397887 | 41398057 | E073 | -22085 |
| chr6 | 41410402 | 41412004 | E073 | -8138 |
| chr6 | 41418607 | 41419813 | E073 | -329 |
| chr6 | 41382928 | 41382978 | E074 | -37164 |
| chr6 | 41383524 | 41383722 | E074 | -36420 |
| chr6 | 41397490 | 41397752 | E074 | -22390 |
| chr6 | 41397887 | 41398057 | E074 | -22085 |
| chr6 | 41398396 | 41398531 | E074 | -21611 |
| chr6 | 41398742 | 41398897 | E074 | -21245 |
| chr6 | 41420968 | 41421417 | E074 | 826 |
| chr6 | 41461923 | 41462180 | E074 | 41781 |
| chr6 | 41462216 | 41462401 | E074 | 42074 |
| chr6 | 41462609 | 41462786 | E074 | 42467 |
| chr6 | 41462849 | 41462907 | E074 | 42707 |
| chr6 | 41378203 | 41378253 | E081 | -41889 |
| chr6 | 41380963 | 41381057 | E081 | -39085 |
| chr6 | 41381094 | 41381307 | E081 | -38835 |
| chr6 | 41381554 | 41381709 | E081 | -38433 |
| chr6 | 41383524 | 41383722 | E081 | -36420 |
| chr6 | 41383990 | 41384204 | E081 | -35938 |
| chr6 | 41384987 | 41385050 | E081 | -35092 |
| chr6 | 41385292 | 41385731 | E081 | -34411 |
| chr6 | 41385775 | 41386007 | E081 | -34135 |
| chr6 | 41386172 | 41386222 | E081 | -33920 |
| chr6 | 41410146 | 41410257 | E081 | -9885 |
| chr6 | 41410281 | 41410395 | E081 | -9747 |
| chr6 | 41410402 | 41412004 | E081 | -8138 |
| chr6 | 41412117 | 41412230 | E081 | -7912 |
| chr6 | 41412407 | 41412560 | E081 | -7582 |
| chr6 | 41412660 | 41412756 | E081 | -7386 |
| chr6 | 41412869 | 41412927 | E081 | -7215 |
| chr6 | 41412933 | 41413396 | E081 | -6746 |
| chr6 | 41418258 | 41418322 | E081 | -1820 |
| chr6 | 41418607 | 41419813 | E081 | -329 |
| chr6 | 41420093 | 41420174 | E081 | 0 |
| chr6 | 41420215 | 41420299 | E081 | 73 |
| chr6 | 41420968 | 41421417 | E081 | 826 |
| chr6 | 41433207 | 41433279 | E081 | 13065 |
| chr6 | 41440968 | 41441082 | E081 | 20826 |
| chr6 | 41456034 | 41456703 | E081 | 35892 |
| chr6 | 41456733 | 41457025 | E081 | 36591 |
| chr6 | 41462216 | 41462401 | E081 | 42074 |
| chr6 | 41462609 | 41462786 | E081 | 42467 |
| chr6 | 41462849 | 41462907 | E081 | 42707 |
| chr6 | 41465413 | 41465552 | E081 | 45271 |
| chr6 | 41384987 | 41385050 | E082 | -35092 |
| chr6 | 41385292 | 41385731 | E082 | -34411 |
| chr6 | 41385775 | 41386007 | E082 | -34135 |
| chr6 | 41386172 | 41386222 | E082 | -33920 |
| chr6 | 41410402 | 41412004 | E082 | -8138 |
| chr6 | 41412117 | 41412230 | E082 | -7912 |
| chr6 | 41412407 | 41412560 | E082 | -7582 |
| chr6 | 41412660 | 41412756 | E082 | -7386 |
| chr6 | 41412869 | 41412927 | E082 | -7215 |
| chr6 | 41412933 | 41413396 | E082 | -6746 |
| chr6 | 41418607 | 41419813 | E082 | -329 |
| chr6 | 41420093 | 41420174 | E082 | 0 |
| chr6 | 41420215 | 41420299 | E082 | 73 |
| chr6 | 41420638 | 41420782 | E082 | 496 |
| chr6 | 41420968 | 41421417 | E082 | 826 |
| chr6 | 41456733 | 41457025 | E082 | 36591 |