rs7768059

Homo sapiens
G>T
None
Check p-value
SNV (Single Nucleotide Variation)
G==0052 (1578/29980,GnomAD)
G==0056 (1640/29118,TOPMED)
G==0037 (183/5008,1000G)
G==0083 (321/3854,ALSPAC)
G==0091 (336/3708,TWINSUK)
chr6:103327431 (GRCh38.p7) (6q16.3)
AD
GWASdb2
1   publication(s)
See rs on genome
2 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 6NC_000006.12:g.103327431G>T
GRCh37.p13 chr 6NC_000006.11:g.103775306G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.026T=0.974
1000GenomesAmericanSub694G=0.050T=0.950
1000GenomesEast AsianSub1008G=0.000T=1.000
1000GenomesEuropeSub1006G=0.087T=0.913
1000GenomesGlobalStudy-wide5008G=0.037T=0.963
1000GenomesSouth AsianSub978G=0.030T=0.970
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.083T=0.917
The Genome Aggregation DatabaseAfricanSub8728G=0.027T=0.973
The Genome Aggregation DatabaseAmericanSub838G=0.040T=0.960
The Genome Aggregation DatabaseEast AsianSub1620G=0.001T=0.999
The Genome Aggregation DatabaseEuropeSub18492G=0.069T=0.930
The Genome Aggregation DatabaseGlobalStudy-wide29980G=0.052T=0.947
The Genome Aggregation DatabaseOtherSub302G=0.070T=0.930
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.056T=0.943
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.091T=0.909
PMID Title Author Journal
21529783A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.Heath ACBiol Psychiatry

P-Value

SNP ID p-value Traits Study
rs77680598.6E-05alcoholism (heaviness of drinking)21529783

eQTL of rs7768059 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7768059 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr6103775442103775506E067136
chr6103775442103775506E071136