Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 8 | NC_000008.11:g.81792593A>G |
GRCh37.p13 chr 8 | NC_000008.10:g.82704828A>G |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | A=0.142 | G=0.858 |
1000Genomes | American | Sub | 694 | A=0.350 | G=0.650 |
1000Genomes | East Asian | Sub | 1008 | A=0.551 | G=0.449 |
1000Genomes | Europe | Sub | 1006 | A=0.338 | G=0.662 |
1000Genomes | Global | Study-wide | 5008 | A=0.327 | G=0.673 |
1000Genomes | South Asian | Sub | 978 | A=0.320 | G=0.680 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.336 | G=0.664 |
The Genome Aggregation Database | African | Sub | 8692 | A=0.166 | G=0.834 |
The Genome Aggregation Database | American | Sub | 822 | A=0.320 | G=0.680 |
The Genome Aggregation Database | East Asian | Sub | 1612 | A=0.582 | G=0.418 |
The Genome Aggregation Database | Europe | Sub | 18398 | A=0.315 | G=0.684 |
The Genome Aggregation Database | Global | Study-wide | 29824 | A=0.287 | G=0.712 |
The Genome Aggregation Database | Other | Sub | 300 | A=0.380 | G=0.620 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.272 | G=0.727 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.330 | G=0.670 |
PMID | Title | Author | Journal |
---|---|---|---|
23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs7834483 | 5.65E-05 | alcohol consumption | 23743675 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value |
---|---|---|---|---|
cg17211192 | chr8:82754475 | SNX16 | 0.0612943235032867 | 1.2172e-22 |
cg23324259 | chr8:82754387 | SNX16 | 0.018582666754204 | 2.5414e-15 |
cg27398817 | chr8:82754497 | SNX16 | 0.0376143056433968 | 2.5760e-14 |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr8 | 82726921 | 82727044 | E067 | 22093 |
chr8 | 82727084 | 82727145 | E067 | 22256 |
chr8 | 82727397 | 82727713 | E067 | 22569 |
chr8 | 82751415 | 82751459 | E067 | 46587 |
chr8 | 82751551 | 82751632 | E067 | 46723 |
chr8 | 82751693 | 82751743 | E067 | 46865 |
chr8 | 82751769 | 82751905 | E067 | 46941 |
chr8 | 82751920 | 82751978 | E067 | 47092 |
chr8 | 82752051 | 82752101 | E067 | 47223 |
chr8 | 82752136 | 82752286 | E067 | 47308 |
chr8 | 82752424 | 82752500 | E067 | 47596 |
chr8 | 82752523 | 82752586 | E067 | 47695 |
chr8 | 82749135 | 82749745 | E068 | 44307 |
chr8 | 82750403 | 82750493 | E068 | 45575 |
chr8 | 82750557 | 82750622 | E068 | 45729 |
chr8 | 82750733 | 82750913 | E068 | 45905 |
chr8 | 82751186 | 82751259 | E068 | 46358 |
chr8 | 82751415 | 82751459 | E068 | 46587 |
chr8 | 82751551 | 82751632 | E068 | 46723 |
chr8 | 82751693 | 82751743 | E068 | 46865 |
chr8 | 82752424 | 82752500 | E068 | 47596 |
chr8 | 82752523 | 82752586 | E068 | 47695 |
chr8 | 82752648 | 82752702 | E068 | 47820 |
chr8 | 82752051 | 82752101 | E069 | 47223 |
chr8 | 82752136 | 82752286 | E069 | 47308 |
chr8 | 82752424 | 82752500 | E069 | 47596 |
chr8 | 82752523 | 82752586 | E069 | 47695 |
chr8 | 82752648 | 82752702 | E069 | 47820 |
chr8 | 82708766 | 82709232 | E070 | 3938 |
chr8 | 82709275 | 82709325 | E070 | 4447 |
chr8 | 82709354 | 82709440 | E070 | 4526 |
chr8 | 82736359 | 82736422 | E070 | 31531 |
chr8 | 82737606 | 82737656 | E070 | 32778 |
chr8 | 82737704 | 82737783 | E070 | 32876 |
chr8 | 82749135 | 82749745 | E070 | 44307 |
chr8 | 82726921 | 82727044 | E071 | 22093 |
chr8 | 82727397 | 82727713 | E071 | 22569 |
chr8 | 82750403 | 82750493 | E071 | 45575 |
chr8 | 82750557 | 82750622 | E071 | 45729 |
chr8 | 82750733 | 82750913 | E071 | 45905 |
chr8 | 82751769 | 82751905 | E071 | 46941 |
chr8 | 82751920 | 82751978 | E071 | 47092 |
chr8 | 82752051 | 82752101 | E071 | 47223 |
chr8 | 82752136 | 82752286 | E071 | 47308 |
chr8 | 82752424 | 82752500 | E071 | 47596 |
chr8 | 82752523 | 82752586 | E071 | 47695 |
chr8 | 82752648 | 82752702 | E071 | 47820 |
chr8 | 82692684 | 82693377 | E072 | -11451 |
chr8 | 82726294 | 82726439 | E072 | 21466 |
chr8 | 82726921 | 82727044 | E072 | 22093 |
chr8 | 82727084 | 82727145 | E072 | 22256 |
chr8 | 82727397 | 82727713 | E072 | 22569 |
chr8 | 82727397 | 82727713 | E073 | 22569 |
chr8 | 82726921 | 82727044 | E074 | 22093 |
chr8 | 82750403 | 82750493 | E074 | 45575 |
chr8 | 82750557 | 82750622 | E074 | 45729 |
chr8 | 82750733 | 82750913 | E074 | 45905 |
chr8 | 82751186 | 82751259 | E074 | 46358 |
chr8 | 82751415 | 82751459 | E074 | 46587 |
chr8 | 82751551 | 82751632 | E074 | 46723 |
chr8 | 82751693 | 82751743 | E074 | 46865 |
chr8 | 82751769 | 82751905 | E074 | 46941 |
chr8 | 82751920 | 82751978 | E074 | 47092 |
chr8 | 82752051 | 82752101 | E074 | 47223 |
chr8 | 82752136 | 82752286 | E074 | 47308 |
chr8 | 82752424 | 82752500 | E074 | 47596 |
chr8 | 82752523 | 82752586 | E074 | 47695 |
chr8 | 82752648 | 82752702 | E074 | 47820 |
chr8 | 82692684 | 82693377 | E081 | -11451 |
chr8 | 82748941 | 82748991 | E081 | 44113 |
chr8 | 82751186 | 82751259 | E081 | 46358 |
chr8 | 82751415 | 82751459 | E081 | 46587 |
chr8 | 82751551 | 82751632 | E081 | 46723 |
chr8 | 82751693 | 82751743 | E081 | 46865 |
chr8 | 82751769 | 82751905 | E081 | 46941 |
chr8 | 82751920 | 82751978 | E081 | 47092 |
chr8 | 82752051 | 82752101 | E081 | 47223 |
chr8 | 82752136 | 82752286 | E081 | 47308 |
chr8 | 82752424 | 82752500 | E081 | 47596 |
chr8 | 82752523 | 82752586 | E081 | 47695 |
chr8 | 82752648 | 82752702 | E081 | 47820 |
chr8 | 82699393 | 82699447 | E082 | -5381 |
chr8 | 82699579 | 82699654 | E082 | -5174 |
chr8 | 82749135 | 82749745 | E082 | 44307 |
chr8 | 82749825 | 82749873 | E082 | 44997 |
chr8 | 82751551 | 82751632 | E082 | 46723 |
chr8 | 82751693 | 82751743 | E082 | 46865 |
chr8 | 82751769 | 82751905 | E082 | 46941 |
chr8 | 82751920 | 82751978 | E082 | 47092 |
chr8 | 82752051 | 82752101 | E082 | 47223 |
chr8 | 82752136 | 82752286 | E082 | 47308 |
chr8 | 82752424 | 82752500 | E082 | 47596 |
chr8 | 82752523 | 82752586 | E082 | 47695 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr8 | 82752902 | 82753069 | E067 | 48074 |
chr8 | 82753140 | 82753307 | E067 | 48312 |
chr8 | 82753499 | 82753591 | E067 | 48671 |
chr8 | 82753602 | 82754599 | E067 | 48774 |
chr8 | 82753499 | 82753591 | E068 | 48671 |
chr8 | 82753602 | 82754599 | E068 | 48774 |
chr8 | 82752902 | 82753069 | E069 | 48074 |
chr8 | 82753140 | 82753307 | E069 | 48312 |
chr8 | 82753499 | 82753591 | E069 | 48671 |
chr8 | 82753602 | 82754599 | E069 | 48774 |
chr8 | 82752902 | 82753069 | E070 | 48074 |
chr8 | 82753140 | 82753307 | E070 | 48312 |
chr8 | 82753499 | 82753591 | E070 | 48671 |
chr8 | 82753602 | 82754599 | E070 | 48774 |
chr8 | 82752902 | 82753069 | E071 | 48074 |
chr8 | 82753140 | 82753307 | E071 | 48312 |
chr8 | 82753499 | 82753591 | E071 | 48671 |
chr8 | 82753602 | 82754599 | E071 | 48774 |
chr8 | 82752902 | 82753069 | E072 | 48074 |
chr8 | 82753140 | 82753307 | E072 | 48312 |
chr8 | 82753499 | 82753591 | E072 | 48671 |
chr8 | 82753602 | 82754599 | E072 | 48774 |
chr8 | 82752902 | 82753069 | E073 | 48074 |
chr8 | 82753140 | 82753307 | E073 | 48312 |
chr8 | 82753499 | 82753591 | E073 | 48671 |
chr8 | 82753602 | 82754599 | E073 | 48774 |
chr8 | 82753140 | 82753307 | E074 | 48312 |
chr8 | 82753499 | 82753591 | E074 | 48671 |
chr8 | 82753602 | 82754599 | E074 | 48774 |
chr8 | 82753602 | 82754599 | E081 | 48774 |
chr8 | 82752902 | 82753069 | E082 | 48074 |
chr8 | 82753140 | 82753307 | E082 | 48312 |
chr8 | 82753499 | 82753591 | E082 | 48671 |
chr8 | 82753602 | 82754599 | E082 | 48774 |