rs7867760

Homo sapiens
G>C
None
Check p-value
SNV (Single Nucleotide Variation)
G==0202 (6043/29908,GnomAD)
G==0174 (5087/29118,TOPMED)
G==0343 (1719/5008,1000G)
G==0198 (763/3854,ALSPAC)
G==0182 (676/3708,TWINSUK)
chr9:86113149 (GRCh38.p7) (9q21.33)
AD
GWASdb2
1   publication(s)
See rs on genome
105 Enhancers around
27 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.86113149G>C
GRCh37.p13 chr 9NC_000009.11:g.88728064G>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.055C=0.945
1000GenomesAmericanSub694G=0.390C=0.610
1000GenomesEast AsianSub1008G=0.751C=0.249
1000GenomesEuropeSub1006G=0.192C=0.808
1000GenomesGlobalStudy-wide5008G=0.343C=0.657
1000GenomesSouth AsianSub978G=0.430C=0.570
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.198C=0.802
The Genome Aggregation DatabaseAfricanSub8708G=0.071C=0.929
The Genome Aggregation DatabaseAmericanSub838G=0.360C=0.640
The Genome Aggregation DatabaseEast AsianSub1602G=0.754C=0.246
The Genome Aggregation DatabaseEuropeSub18458G=0.208C=0.791
The Genome Aggregation DatabaseGlobalStudy-wide29908G=0.202C=0.797
The Genome Aggregation DatabaseOtherSub302G=0.190C=0.810
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.174C=0.825
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.182C=0.818
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs78677600.000893alcohol dependence21314694

eQTL of rs7867760 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7867760 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr98869251488692822E067-35242
chr98869287288692926E067-35138
chr98871252188712817E067-15247
chr98874140988741507E06713345
chr98874151188743214E06713447
chr98869194988692031E068-36033
chr98869212588692491E068-35573
chr98869251488692822E068-35242
chr98869477188695354E068-32710
chr98873128988731343E0683225
chr98869194988692031E069-36033
chr98869212588692491E069-35573
chr98869251488692822E069-35242
chr98869287288692926E069-35138
chr98869477188695354E069-32710
chr98869827288698322E069-29742
chr98869859688698760E069-29304
chr98871252188712817E069-15247
chr98873128988731343E0693225
chr98873210888732162E0694044
chr98867924188679424E070-48640
chr98867945088679490E070-48574
chr98867957688679651E070-48413
chr98869212588692491E070-35573
chr98869477188695354E070-32710
chr98869762788697700E070-30364
chr98869785688698099E070-29965
chr98869827288698322E070-29742
chr98869859688698760E070-29304
chr98869879788698920E070-29144
chr98869896488699010E070-29054
chr98869911488699164E070-28900
chr98869931788699367E070-28697
chr98869937388699448E070-28616
chr98869958488699648E070-28416
chr98871130288711601E070-16463
chr98871160988711700E070-16364
chr98871194288712011E070-16053
chr98873128988731343E0703225
chr98873210888732162E0704044
chr98873227088732466E0704206
chr98873250488732695E0704440
chr98874140988741507E07013345
chr98874151188743214E07013447
chr98869194988692031E071-36033
chr98869212588692491E071-35573
chr98869785688698099E071-29965
chr98869827288698322E071-29742
chr98871252188712817E071-15247
chr98873098788731037E0712923
chr98873128988731343E0713225
chr98874140988741507E07113345
chr98874151188743214E07113447
chr98869179888691890E072-36174
chr98869194988692031E072-36033
chr98869212588692491E072-35573
chr98869251488692822E072-35242
chr98869287288692926E072-35138
chr98869330688693488E072-34576
chr98869477188695354E072-32710
chr98874151188743214E07213447
chr98869212588692491E073-35573
chr98869251488692822E073-35242
chr98869386988693944E073-34120
chr98869434388694665E073-33399
chr98869477188695354E073-32710
chr98871252188712817E073-15247
chr98873128988731343E0733225
chr98874140988741507E07313345
chr98869212588692491E074-35573
chr98869251488692822E074-35242
chr98869785688698099E074-29965
chr98874151188743214E07413447
chr98867924188679424E081-48640
chr98867945088679490E081-48574
chr98869557388695709E081-32355
chr98871048988710604E081-17460
chr98871064788710697E081-17367
chr98871072288710776E081-17288
chr98871078588710845E081-17219
chr98871095288711002E081-17062
chr98871130288711601E081-16463
chr98871252188712817E081-15247
chr98873128988731343E0813225
chr98873210888732162E0814044
chr98874111688741166E08113052
chr98874140988741507E08113345
chr98874151188743214E08113447
chr98867924188679424E082-48640
chr98867945088679490E082-48574
chr98867957688679651E082-48413
chr98867991688679988E082-48076
chr98869477188695354E082-32710
chr98869557388695709E082-32355
chr98869785688698099E082-29965
chr98869827288698322E082-29742
chr98869931788699367E082-28697
chr98871078588710845E082-17219
chr98871095288711002E082-17062
chr98871130288711601E082-16463
chr98871160988711700E082-16364
chr98873210888732162E0824044
chr98873227088732466E0824206
chr98873250488732695E0824440
chr98874140988741507E08213345










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr98871321488713454E067-14610
chr98871346388713543E067-14521
chr98871361488715517E067-12547
chr98871321488713454E068-14610
chr98871346388713543E068-14521
chr98871361488715517E068-12547
chr98871321488713454E069-14610
chr98871346388713543E069-14521
chr98871361488715517E069-12547
chr98871321488713454E070-14610
chr98871346388713543E070-14521
chr98871361488715517E070-12547
chr98871321488713454E071-14610
chr98871346388713543E071-14521
chr98871361488715517E071-12547
chr98871321488713454E072-14610
chr98871346388713543E072-14521
chr98871361488715517E072-12547
chr98871361488715517E073-12547
chr98871321488713454E074-14610
chr98871346388713543E074-14521
chr98871361488715517E074-12547
chr98871321488713454E081-14610
chr98871346388713543E081-14521
chr98871321488713454E082-14610
chr98871346388713543E082-14521
chr98871361488715517E082-12547