rs7867889

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0317 (9494/29926,GnomAD)
A=0286 (8346/29118,TOPMED)
A=0160 (803/5008,1000G)
A=0389 (1499/3854,ALSPAC)
A=0388 (1439/3708,TWINSUK)
chr9:113131960 (GRCh38.p7) (9q32)
AD
GWASdb2
1   publication(s)
See rs on genome
327 Enhancers around
9 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.113131960G>A
GRCh37.p13 chr 9NC_000009.11:g.115894240G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.889A=0.111
1000GenomesAmericanSub694G=0.780A=0.220
1000GenomesEast AsianSub1008G=0.969A=0.031
1000GenomesEuropeSub1006G=0.622A=0.378
1000GenomesGlobalStudy-wide5008G=0.840A=0.160
1000GenomesSouth AsianSub978G=0.910A=0.090
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.611A=0.389
The Genome Aggregation DatabaseAfricanSub8704G=0.836A=0.164
The Genome Aggregation DatabaseAmericanSub838G=0.800A=0.200
The Genome Aggregation DatabaseEast AsianSub1622G=0.974A=0.026
The Genome Aggregation DatabaseEuropeSub18460G=0.579A=0.420
The Genome Aggregation DatabaseGlobalStudy-wide29926G=0.682A=0.317
The Genome Aggregation DatabaseOtherSub302G=0.680A=0.320
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.713A=0.286
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.612A=0.388
PMID Title Author Journal
21529783A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.Heath ACBiol Psychiatry

P-Value

SNP ID p-value Traits Study
rs78678893.5E-05alcoholism (heaviness of drinking)21529783

eQTL of rs7867889 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7867889 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr9115893116115893166E067-1074
chr9115893733115893813E067-427
chr9115893826115894173E067-67
chr9115894189115894408E0670
chr9115894474115894524E067234
chr9115894535115894616E067295
chr9115899331115900468E0675091
chr9115900522115900661E0676282
chr9115900858115900925E0676618
chr9115901070115901320E0676830
chr9115901810115901998E0677570
chr9115902151115902218E0677911
chr9115902343115902635E0678103
chr9115918224115918559E06723984
chr9115918738115919011E06724498
chr9115919031115919081E06724791
chr9115919092115919143E06724852
chr9115919289115919383E06725049
chr9115919401115919445E06725161
chr9115919567115919621E06725327
chr9115919639115919731E06725399
chr9115920234115920397E06725994
chr9115920942115921005E06726702
chr9115921100115921152E06726860
chr9115922954115923152E06728714
chr9115923175115923296E06728935
chr9115923508115923850E06729268
chr9115923890115923940E06729650
chr9115926611115926691E06732371
chr9115926692115926817E06732452
chr9115926832115927156E06732592
chr9115927288115927349E06733048
chr9115927375115927503E06733135
chr9115927560115927622E06733320
chr9115874313115874380E068-19860
chr9115874853115875225E068-19015
chr9115893116115893166E068-1074
chr9115893733115893813E068-427
chr9115893826115894173E068-67
chr9115894189115894408E0680
chr9115894474115894524E068234
chr9115894535115894616E068295
chr9115899116115899241E0684876
chr9115899331115900468E0685091
chr9115900522115900661E0686282
chr9115900858115900925E0686618
chr9115901070115901320E0686830
chr9115901810115901998E0687570
chr9115902151115902218E0687911
chr9115902343115902635E0688103
chr9115903302115903672E0689062
chr9115904020115904070E0689780
chr9115905693115906452E06811453
chr9115909566115910039E06815326
chr9115920234115920397E06825994
chr9115920942115921005E06826702
chr9115921100115921152E06826860
chr9115921323115921418E06827083
chr9115922348115922412E06828108
chr9115922954115923152E06828714
chr9115923175115923296E06828935
chr9115923508115923850E06829268
chr9115923890115923940E06829650
chr9115925383115925585E06831143
chr9115925692115925755E06831452
chr9115925892115925936E06831652
chr9115926611115926691E06832371
chr9115926692115926817E06832452
chr9115926832115927156E06832592
chr9115927288115927349E06833048
chr9115927375115927503E06833135
chr9115927560115927622E06833320
chr9115927991115928071E06833751
chr9115928117115928167E06833877
chr9115928524115928574E06834284
chr9115929068115929162E06834828
chr9115883927115883967E069-10273
chr9115893116115893166E069-1074
chr9115893733115893813E069-427
chr9115893826115894173E069-67
chr9115894189115894408E0690
chr9115894474115894524E069234
chr9115894535115894616E069295
chr9115897944115898343E0693704
chr9115898722115898772E0694482
chr9115899116115899241E0694876
chr9115899331115900468E0695091
chr9115900522115900661E0696282
chr9115900858115900925E0696618
chr9115901070115901320E0696830
chr9115901810115901998E0697570
chr9115902151115902218E0697911
chr9115902343115902635E0698103
chr9115903302115903672E0699062
chr9115904020115904070E0699780
chr9115905693115906452E06911453
chr9115909566115910039E06915326
chr9115920234115920397E06925994
chr9115920942115921005E06926702
chr9115921100115921152E06926860
chr9115921323115921418E06927083
chr9115922348115922412E06928108
chr9115922954115923152E06928714
chr9115923175115923296E06928935
chr9115923508115923850E06929268
chr9115923890115923940E06929650
chr9115925184115925280E06930944
chr9115925383115925585E06931143
chr9115925692115925755E06931452
chr9115925892115925936E06931652
chr9115926611115926691E06932371
chr9115926692115926817E06932452
chr9115926832115927156E06932592
chr9115927288115927349E06933048
chr9115927375115927503E06933135
chr9115927560115927622E06933320
chr9115927991115928071E06933751
chr9115928117115928167E06933877
chr9115928524115928574E06934284
chr9115926832115927156E07032592
chr9115927288115927349E07033048
chr9115927375115927503E07033135
chr9115927560115927622E07033320
chr9115873927115874295E071-19945
chr9115874313115874380E071-19860
chr9115874438115874518E071-19722
chr9115874853115875225E071-19015
chr9115892137115892214E071-2026
chr9115892274115892329E071-1911
chr9115892342115892421E071-1819
chr9115892781115893014E071-1226
chr9115893116115893166E071-1074
chr9115893733115893813E071-427
chr9115893826115894173E071-67
chr9115894189115894408E0710
chr9115894474115894524E071234
chr9115894535115894616E071295
chr9115897944115898343E0713704
chr9115898722115898772E0714482
chr9115899116115899241E0714876
chr9115899331115900468E0715091
chr9115900522115900661E0716282
chr9115900858115900925E0716618
chr9115901070115901320E0716830
chr9115901810115901998E0717570
chr9115902151115902218E0717911
chr9115902343115902635E0718103
chr9115904020115904070E0719780
chr9115905693115906452E07111453
chr9115906712115906806E07112472
chr9115906850115906919E07112610
chr9115909566115910039E07115326
chr9115910068115910122E07115828
chr9115910470115911121E07116230
chr9115911171115911287E07116931
chr9115911330115911380E07117090
chr9115911439115911847E07117199
chr9115920942115921005E07126702
chr9115921100115921152E07126860
chr9115921323115921418E07127083
chr9115922348115922412E07128108
chr9115922954115923152E07128714
chr9115923175115923296E07128935
chr9115923508115923850E07129268
chr9115923890115923940E07129650
chr9115924002115924062E07129762
chr9115924080115924164E07129840
chr9115924310115924502E07130070
chr9115924671115924722E07130431
chr9115925072115925116E07130832
chr9115925184115925280E07130944
chr9115925383115925585E07131143
chr9115925692115925755E07131452
chr9115925892115925936E07131652
chr9115926611115926691E07132371
chr9115926692115926817E07132452
chr9115926832115927156E07132592
chr9115927288115927349E07133048
chr9115927375115927503E07133135
chr9115927560115927622E07133320
chr9115927991115928071E07133751
chr9115928117115928167E07133877
chr9115928524115928574E07134284
chr9115929068115929162E07134828
chr9115929217115929286E07134977
chr9115852394115852455E072-41785
chr9115873927115874295E072-19945
chr9115874313115874380E072-19860
chr9115874853115875225E072-19015
chr9115883927115883967E072-10273
chr9115892274115892329E072-1911
chr9115892342115892421E072-1819
chr9115892781115893014E072-1226
chr9115893116115893166E072-1074
chr9115893733115893813E072-427
chr9115893826115894173E072-67
chr9115894189115894408E0720
chr9115894474115894524E072234
chr9115894535115894616E072295
chr9115899116115899241E0724876
chr9115899331115900468E0725091
chr9115900522115900661E0726282
chr9115900858115900925E0726618
chr9115901070115901320E0726830
chr9115903302115903672E0729062
chr9115904020115904070E0729780
chr9115905693115906452E07211453
chr9115909566115910039E07215326
chr9115917830115917889E07223590
chr9115918011115918055E07223771
chr9115918224115918559E07223984
chr9115918738115919011E07224498
chr9115919031115919081E07224791
chr9115919092115919143E07224852
chr9115919289115919383E07225049
chr9115919401115919445E07225161
chr9115919567115919621E07225327
chr9115919639115919731E07225399
chr9115920234115920397E07225994
chr9115920942115921005E07226702
chr9115921100115921152E07226860
chr9115922954115923152E07228714
chr9115923175115923296E07228935
chr9115923508115923850E07229268
chr9115923890115923940E07229650
chr9115924002115924062E07229762
chr9115924080115924164E07229840
chr9115924310115924502E07230070
chr9115924671115924722E07230431
chr9115925072115925116E07230832
chr9115925184115925280E07230944
chr9115925383115925585E07231143
chr9115926611115926691E07232371
chr9115926692115926817E07232452
chr9115926832115927156E07232592
chr9115927288115927349E07233048
chr9115927375115927503E07233135
chr9115927560115927622E07233320
chr9115927991115928071E07233751
chr9115928117115928167E07233877
chr9115928524115928574E07234284
chr9115929068115929162E07234828
chr9115892781115893014E073-1226
chr9115893116115893166E073-1074
chr9115893733115893813E073-427
chr9115893826115894173E073-67
chr9115894189115894408E0730
chr9115894474115894524E073234
chr9115894535115894616E073295
chr9115899331115900468E0735091
chr9115900522115900661E0736282
chr9115900858115900925E0736618
chr9115901070115901320E0736830
chr9115901810115901998E0737570
chr9115902151115902218E0737911
chr9115902343115902635E0738103
chr9115917830115917889E07323590
chr9115918011115918055E07323771
chr9115918224115918559E07323984
chr9115918738115919011E07324498
chr9115919031115919081E07324791
chr9115919092115919143E07324852
chr9115919289115919383E07325049
chr9115919401115919445E07325161
chr9115919567115919621E07325327
chr9115919639115919731E07325399
chr9115926611115926691E07332371
chr9115926692115926817E07332452
chr9115926832115927156E07332592
chr9115927288115927349E07333048
chr9115927375115927503E07333135
chr9115927560115927622E07333320
chr9115927991115928071E07333751
chr9115928117115928167E07333877
chr9115928524115928574E07334284
chr9115892781115893014E074-1226
chr9115893116115893166E074-1074
chr9115893733115893813E074-427
chr9115893826115894173E074-67
chr9115894189115894408E0740
chr9115894474115894524E074234
chr9115894535115894616E074295
chr9115898722115898772E0744482
chr9115899116115899241E0744876
chr9115899331115900468E0745091
chr9115900522115900661E0746282
chr9115900858115900925E0746618
chr9115901070115901320E0746830
chr9115901810115901998E0747570
chr9115902151115902218E0747911
chr9115902343115902635E0748103
chr9115903302115903672E0749062
chr9115905693115906452E07411453
chr9115909566115910039E07415326
chr9115910068115910122E07415828
chr9115919401115919445E07425161
chr9115919567115919621E07425327
chr9115919639115919731E07425399
chr9115921323115921418E07427083
chr9115922348115922412E07428108
chr9115922954115923152E07428714
chr9115923175115923296E07428935
chr9115923508115923850E07429268
chr9115923890115923940E07429650
chr9115924002115924062E07429762
chr9115924080115924164E07429840
chr9115924310115924502E07430070
chr9115924671115924722E07430431
chr9115925072115925116E07430832
chr9115925184115925280E07430944
chr9115925383115925585E07431143
chr9115925692115925755E07431452
chr9115925892115925936E07431652
chr9115926611115926691E07432371
chr9115926692115926817E07432452
chr9115926832115927156E07432592
chr9115927288115927349E07433048
chr9115927375115927503E07433135
chr9115927560115927622E07433320
chr9115927991115928071E07433751
chr9115928117115928167E07433877
chr9115928524115928574E07434284
chr9115929068115929162E07434828
chr9115929217115929286E07434977
chr9115926611115926691E08132371
chr9115926692115926817E08132452
chr9115926832115927156E08132592









Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr9115912513115915377E06718273
chr9115912513115915377E06818273
chr9115912513115915377E06918273
chr9115912513115915377E07018273
chr9115912513115915377E07118273
chr9115912513115915377E07218273
chr9115912513115915377E07318273
chr9115912513115915377E07418273
chr9115912513115915377E08218273