rs7933236

Homo sapiens
G>C
ZBTB44 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
C=0038 (1158/29958,GnomAD)
C=0058 (1707/29118,TOPMED)
C=0041 (206/5008,1000G)
C=0013 (52/3854,ALSPAC)
C=0014 (51/3708,TWINSUK)
chr11:130241833 (GRCh38.p7) (11q24.3)
ND
GWASdb2
1   publication(s)
See rs on genome
96 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.130241833G>C
GRCh37.p13 chr 11NC_000011.9:g.130111728G>C

Gene: ZBTB44, zinc finger and BTB domain containing 44(minus strand)

Molecule type Change Amino acid[Codon] SO Term
ZBTB44 transcript variant 1NM_001301098.1:c.N/AIntron Variant
ZBTB44 transcript variant 2NM_001301099.1:c.N/AIntron Variant
ZBTB44 transcript variant 3NM_014155.4:c.N/AIntron Variant
ZBTB44 transcript variant X1XM_005271521.4:c.N/AIntron Variant
ZBTB44 transcript variant X4XM_005271522.4:c.N/AIntron Variant
ZBTB44 transcript variant X3XM_006718825.3:c.N/AIntron Variant
ZBTB44 transcript variant X9XM_006718826.3:c.N/AIntron Variant
ZBTB44 transcript variant X5XM_011542789.2:c.N/AIntron Variant
ZBTB44 transcript variant X6XM_017017623.1:c.N/AIntron Variant
ZBTB44 transcript variant X10XM_017017624.1:c.N/AIntron Variant
ZBTB44 transcript variant X2XR_246421.4:n.N/AIntron Variant
ZBTB44 transcript variant X8XR_246423.4:n.N/AIntron Variant
ZBTB44 transcript variant X7XR_947826.2:n.N/AIntron Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.863C=0.137
1000GenomesAmericanSub694G=0.980C=0.020
1000GenomesEast AsianSub1008G=1.000C=0.000
1000GenomesEuropeSub1006G=0.991C=0.009
1000GenomesGlobalStudy-wide5008G=0.959C=0.041
1000GenomesSouth AsianSub978G=1.000C=0.000
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.987C=0.013
The Genome Aggregation DatabaseAfricanSub8724G=0.889C=0.111
The Genome Aggregation DatabaseAmericanSub838G=0.970C=0.030
The Genome Aggregation DatabaseEast AsianSub1620G=1.000C=0.000
The Genome Aggregation DatabaseEuropeSub18474G=0.991C=0.008
The Genome Aggregation DatabaseGlobalStudy-wide29958G=0.961C=0.038
The Genome Aggregation DatabaseOtherSub302G=0.970C=0.030
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.941C=0.058
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.986C=0.014
PMID Title Author Journal
19268276Genome-wide association study of smoking initiation and current smoking.Vink JMAm J Hum Genet

P-Value

SNP ID p-value Traits Study
rs79332360.000671nicotine smoking19268276

eQTL of rs7933236 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
Chr11:130111728ZBTB44ENSG00000196323.7G>C1.6949e-3-72853Cortex

meQTL of rs7933236 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr11130116649130116995E0674921
chr11130117228130117278E0675500
chr11130117531130117597E0675803
chr11130119609130119708E0677881
chr11130130642130130962E06718914
chr11130131252130131811E06719524
chr11130135927130136322E06724199
chr11130136362130136412E06724634
chr11130136608130136668E06724880
chr11130150262130150314E06738534
chr11130156500130156667E06744772
chr11130156672130156725E06744944
chr11130116299130116506E0684571
chr11130116649130116995E0684921
chr11130117228130117278E0685500
chr11130117531130117597E0685803
chr11130135927130136322E06824199
chr11130136362130136412E06824634
chr11130140068130140165E06828340
chr11130149819130149944E06838091
chr11130150262130150314E06838534
chr11130156500130156667E06844772
chr11130156672130156725E06844944
chr11130116649130116995E0694921
chr11130117228130117278E0695500
chr11130117531130117597E0695803
chr11130133025130133075E06921297
chr11130133283130133619E06921555
chr11130135927130136322E06924199
chr11130136362130136412E06924634
chr11130082692130083894E070-27834
chr11130156500130156667E07044772
chr11130156672130156725E07044944
chr11130082692130083894E071-27834
chr11130109240130109435E071-2293
chr11130113190130113385E0711462
chr11130113807130113994E0712079
chr11130116299130116506E0714571
chr11130116649130116995E0714921
chr11130117228130117278E0715500
chr11130117531130117597E0715803
chr11130119609130119708E0717881
chr11130126077130126131E07114349
chr11130130642130130962E07118914
chr11130131252130131811E07119524
chr11130135927130136322E07124199
chr11130136362130136412E07124634
chr11130149819130149944E07138091
chr11130150262130150314E07138534
chr11130151854130151904E07140126
chr11130155823130155873E07144095
chr11130156500130156667E07144772
chr11130156672130156725E07144944
chr11130116299130116506E0724571
chr11130116649130116995E0724921
chr11130117228130117278E0725500
chr11130117531130117597E0725803
chr11130133283130133619E07221555
chr11130133682130133799E07221954
chr11130135927130136322E07224199
chr11130142853130142935E07231125
chr11130089944130090006E073-21722
chr11130090119130090163E073-21565
chr11130117228130117278E0735500
chr11130109240130109435E074-2293
chr11130115430130115537E0743702
chr11130115629130116021E0743901
chr11130116299130116506E0744571
chr11130116649130116995E0744921
chr11130117228130117278E0745500
chr11130117531130117597E0745803
chr11130135927130136322E07424199
chr11130136362130136412E07424634
chr11130142853130142935E07431125
chr11130150262130150314E07438534
chr11130078549130078620E081-33108
chr11130082692130083894E081-27834
chr11130084079130084139E081-27589
chr11130084175130084229E081-27499
chr11130115629130116021E0813901
chr11130116299130116506E0814571
chr11130117228130117278E0815500
chr11130117531130117597E0815803
chr11130130642130130962E08118914
chr11130131252130131811E08119524
chr11130131902130132035E08120174
chr11130132933130132983E08121205
chr11130133025130133075E08121297
chr11130133283130133619E08121555
chr11130131252130131811E08219524
chr11130132933130132983E08221205
chr11130133025130133075E08221297
chr11130133283130133619E08221555
chr11130133682130133799E08221954
chr11130133851130133946E08222123
chr11130133987130134051E08222259