rs7933931

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0139 (4173/29944,GnomAD)
G=0144 (4194/29118,TOPMED)
G=0138 (690/5008,1000G)
G=0152 (584/3854,ALSPAC)
G=0156 (577/3708,TWINSUK)
chr11:108955180 (GRCh38.p7) (11q22.3)
CD
GWASdb2
1   publication(s)
See rs on genome
57 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.108955180A>G
GRCh37.p13 chr 11NC_000011.9:g.108825907A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.844G=0.156
1000GenomesAmericanSub694A=0.890G=0.110
1000GenomesEast AsianSub1008A=0.827G=0.173
1000GenomesEuropeSub1006A=0.846G=0.154
1000GenomesGlobalStudy-wide5008A=0.862G=0.138
1000GenomesSouth AsianSub978A=0.920G=0.080
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.848G=0.152
The Genome Aggregation DatabaseAfricanSub8710A=0.866G=0.134
The Genome Aggregation DatabaseAmericanSub838A=0.910G=0.090
The Genome Aggregation DatabaseEast AsianSub1616A=0.806G=0.194
The Genome Aggregation DatabaseEuropeSub18478A=0.860G=0.139
The Genome Aggregation DatabaseGlobalStudy-wide29944A=0.860G=0.139
The Genome Aggregation DatabaseOtherSub302A=0.850G=0.150
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.856G=0.144
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.844G=0.156
PMID Title Author Journal
23958962Genome-wide association study of cocaine dependence and related traits: FAM53B identified as a risk gene.Gelernter JMol Psychiatry

P-Value

SNP ID p-value Traits Study
rs79339310.000057cocaine dependence,EA23958962
rs79339310.000188cocaine dependence23958962

eQTL of rs7933931 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs7933931 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr11108793391108793484E068-32423
chr11108793597108793682E068-32225
chr11108793711108793812E068-32095
chr11108793908108794045E068-31862
chr11108794225108794666E068-31241
chr11108795083108795175E068-30732
chr11108795328108795378E068-30529
chr11108795478108795532E068-30375
chr11108795812108795878E068-30029
chr11108795915108796010E068-29897
chr11108796136108796291E068-29616
chr11108797637108798012E068-27895
chr11108798044108798137E068-27770
chr11108798159108798383E068-27524
chr11108808891108809182E069-16725
chr11108787088108787437E070-38470
chr11108795083108795175E070-30732
chr11108795328108795378E070-30529
chr11108795478108795532E070-30375
chr11108795812108795878E070-30029
chr11108795915108796010E070-29897
chr11108797637108798012E070-27895
chr11108798044108798137E070-27770
chr11108798159108798383E070-27524
chr11108837757108838282E07011850
chr11108808407108808842E072-17065
chr11108808891108809182E072-16725
chr11108809210108809652E072-16255
chr11108837757108838282E07211850
chr11108809210108809652E074-16255
chr11108798636108798909E081-26998
chr11108798938108799186E081-26721
chr11108799344108799404E081-26503
chr11108814328108814485E081-11422
chr11108814536108814670E081-11237
chr11108814723108814805E081-11102
chr11108837757108838282E08111850
chr11108838293108838757E08112386
chr11108839022108839445E08113115
chr11108845976108846041E08120069
chr11108846225108846321E08120318
chr11108846381108846839E08120474
chr11108797053108797550E082-28357
chr11108798636108798909E082-26998
chr11108798938108799186E082-26721
chr11108814171108814249E082-11658
chr11108814328108814485E082-11422
chr11108814536108814670E082-11237
chr11108814723108814805E082-11102
chr11108814813108815025E082-10882
chr11108829262108829811E0823355
chr11108829940108830080E0824033
chr11108837757108838282E08211850
chr11108838293108838757E08212386
chr11108839022108839445E08213115
chr11108846225108846321E08220318
chr11108846381108846839E08220474