rs803174

Homo sapiens
G>A
CDK14 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
G==0044 (1327/29974,GnomAD)
G==0056 (1630/29118,TOPMED)
G==0053 (264/5008,1000G)
G==0057 (218/3854,ALSPAC)
G==0058 (215/3708,TWINSUK)
chr7:91165480 (GRCh38.p7) (7q21.13)
AD
GWASdb2
1   publication(s)
See rs on genome
67 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 7NC_000007.14:g.91165480G>A
GRCh37.p13 chr 7NC_000007.13:g.90794795G>A

Gene: CDK14, cyclin-dependent kinase 14(plus strand)

Molecule type Change Amino acid[Codon] SO Term
CDK14 transcript variant 1NM_001287135.1:c.N/AIntron Variant
CDK14 transcript variant 3NM_001287136.1:c.N/AIntron Variant
CDK14 transcript variant 4NM_001287137.1:c.N/AIntron Variant
CDK14 transcript variant 2NM_012395.3:c.N/AIntron Variant
CDK14 transcript variant X2XM_005250436.3:c.N/AIntron Variant
CDK14 transcript variant X5XM_005250438.3:c.N/AIntron Variant
CDK14 transcript variant X4XM_005250439.2:c.N/AIntron Variant
CDK14 transcript variant X3XM_017012320.1:c.N/AIntron Variant
CDK14 transcript variant X6XM_017012321.1:c.N/AIntron Variant
CDK14 transcript variant X1XM_011516306.2:c.N/AGenic Downstream Transcript Variant
CDK14 transcript variant X8XM_011516307.2:c.N/AGenic Downstream Transcript Variant
CDK14 transcript variant X7XM_017012322.1:c.N/AGenic Downstream Transcript Variant
CDK14 transcript variant X9XR_927477.2:n.N/AGenic Downstream Transcript Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.034A=0.966
1000GenomesAmericanSub694G=0.050A=0.950
1000GenomesEast AsianSub1008G=0.000A=1.000
1000GenomesEuropeSub1006G=0.066A=0.934
1000GenomesGlobalStudy-wide5008G=0.053A=0.947
1000GenomesSouth AsianSub978G=0.120A=0.880
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.057A=0.943
The Genome Aggregation DatabaseAfricanSub8722G=0.037A=0.963
The Genome Aggregation DatabaseAmericanSub838G=0.030A=0.970
The Genome Aggregation DatabaseEast AsianSub1620G=0.001A=0.999
The Genome Aggregation DatabaseEuropeSub18496G=0.050A=0.949
The Genome Aggregation DatabaseGlobalStudy-wide29974G=0.044A=0.955
The Genome Aggregation DatabaseOtherSub298G=0.110A=0.890
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.056A=0.944
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.058A=0.942
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs8031740.000326alcohol dependence21314694

eQTL of rs803174 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs803174 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr79076656890766696E068-28099
chr79082123490821304E06826439
chr79082132190821567E06826526
chr79074920190749285E070-45510
chr79074939490749586E070-45209
chr79075553890755614E070-39181
chr79075575190755896E070-38899
chr79075593890756883E070-37912
chr79076459790764690E070-30105
chr79076472790764985E070-29810
chr79076499890765370E070-29425
chr79079814590798401E0703350
chr79079841990798760E0703624
chr79079876790799149E0703972
chr79079920490799425E0704409
chr79082391590824136E07029120
chr79082416890824508E07029373
chr79082847090829954E07033675
chr79083051390830719E07035718
chr79083074690831431E07035951
chr79083150190831551E07036706
chr79075553890755614E081-39181
chr79075575190755896E081-38899
chr79075593890756883E081-37912
chr79076459790764690E081-30105
chr79076472790764985E081-29810
chr79076656890766696E081-28099
chr79076690290766991E081-27804
chr79076704690767111E081-27684
chr79076716590767351E081-27444
chr79077725890777318E081-17477
chr79077794590777995E081-16800
chr79077813790778197E081-16598
chr79077852090779456E081-15339
chr79077955590779609E081-15186
chr79078050090780560E081-14235
chr79078400390784053E081-10742
chr79078415990784313E081-10482
chr79078448390784574E081-10221
chr79078481290784991E081-9804
chr79078513990785251E081-9544
chr79078537090785513E081-9282
chr79078653390786705E081-8090
chr79079841990798760E0813624
chr79079876790799149E0813972
chr79079920490799425E0814409
chr79082221490822306E08127419
chr79082236090822424E08127565
chr79082263390822792E08127838
chr79082284490822964E08128049
chr79082391590824136E08129120
chr79082847090829954E08133675
chr79083051390830719E08135718
chr79083074690831431E08135951
chr79075593890756883E082-37912
chr79077461390774757E082-20038
chr79077813790778197E082-16598
chr79077852090779456E082-15339
chr79077955590779609E082-15186
chr79078513990785251E082-9544
chr79078537090785513E082-9282
chr79078653390786705E082-8090
chr79082221490822306E08227419
chr79082847090829954E08233675
chr79083051390830719E08235718
chr79083074690831431E08235951
chr79083150190831551E08236706