rs8062326

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0063 (1891/29970,GnomAD)
A=0066 (1928/29118,TOPMED)
A=0051 (256/5008,1000G)
A=0029 (110/3854,ALSPAC)
A=0031 (114/3708,TWINSUK)
chr16:19144694 (GRCh38.p7) (16p12.3)
AD
GWASdb2 | GWASCatalog
1   publication(s)
See rs on genome
91 Enhancers around
34 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 16NC_000016.10:g.19144694G>A
GRCh37.p13 chr 16NC_000016.9:g.19156016G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.880A=0.120
1000GenomesAmericanSub694G=0.960A=0.040
1000GenomesEast AsianSub1008G=1.000A=0.000
1000GenomesEuropeSub1006G=0.960A=0.040
1000GenomesGlobalStudy-wide5008G=0.949A=0.051
1000GenomesSouth AsianSub978G=0.970A=0.030
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.971A=0.029
The Genome Aggregation DatabaseAfricanSub8714G=0.896A=0.104
The Genome Aggregation DatabaseAmericanSub838G=0.920A=0.080
The Genome Aggregation DatabaseEast AsianSub1618G=0.998A=0.002
The Genome Aggregation DatabaseEuropeSub18498G=0.951A=0.048
The Genome Aggregation DatabaseGlobalStudy-wide29970G=0.936A=0.063
The Genome Aggregation DatabaseOtherSub302G=0.960A=0.040
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.933A=0.066
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.969A=0.031
PMID Title Author Journal
21876473Confirmation of prior evidence of genetic susceptibility to alcoholism in a genome-wide association study of comorbid alcoholism and bipolar disorder.Lydall GJPsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs80623264E-06alcohol dependence21876473

eQTL of rs8062326 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs8062326 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr161912733719127377E067-28639
chr161912748919127608E067-28408
chr161914184219143259E067-12757
chr161911688819116997E068-39019
chr161912710519127160E068-28856
chr161912733719127377E068-28639
chr161912748919127608E068-28408
chr161912765719127795E068-28221
chr161912785119127901E068-28115
chr161912807319128900E068-27116
chr161912892719129314E068-26702
chr161913100819131281E068-24735
chr161914021419140493E068-15523
chr161914064519140695E068-15321
chr161914075919141236E068-14780
chr161914149219141587E068-14429
chr161914172519141775E068-14241
chr161914184219143259E068-12757
chr161914326719143470E068-12546
chr161914802519148167E068-7849
chr161914820419148916E068-7100
chr161915450619155012E068-1004
chr161919712019197298E06841104
chr161912733719127377E069-28639
chr161912807319128900E069-27116
chr161913100819131281E069-24735
chr161914184219143259E069-12757
chr161914326719143470E069-12546
chr161914726419147866E069-8150
chr161914802519148167E069-7849
chr161918224419182294E06926228
chr161919601419196603E06939998
chr161919682019196870E06940804
chr161919696419197091E06940948
chr161919712019197298E06941104
chr161918155819181622E07025542
chr161912733719127377E071-28639
chr161912748919127608E071-28408
chr161912765719127795E071-28221
chr161912785119127901E071-28115
chr161912892719129314E071-26702
chr161913100819131281E071-24735
chr161914021419140493E071-15523
chr161914064519140695E071-15321
chr161914149219141587E071-14429
chr161914172519141775E071-14241
chr161914184219143259E071-12757
chr161914326719143470E071-12546
chr161914370819143959E071-12057
chr161914726419147866E071-8150
chr161914802519148167E071-7849
chr161919601419196603E07139998
chr161914149219141587E072-14429
chr161914172519141775E072-14241
chr161914184219143259E072-12757
chr161914326719143470E072-12546
chr161912733719127377E073-28639
chr161912807319128900E073-27116
chr161914184219143259E073-12757
chr161914326719143470E073-12546
chr161914726419147866E073-8150
chr161914802519148167E073-7849
chr161914820419148916E073-7100
chr161919682019196870E07340804
chr161919696419197091E07340948
chr161919712019197298E07341104
chr161919779919198020E07341783
chr161912710519127160E074-28856
chr161912733719127377E074-28639
chr161912748919127608E074-28408
chr161912765719127795E074-28221
chr161912785119127901E074-28115
chr161913100819131281E074-24735
chr161914010719140164E074-15852
chr161914021419140493E074-15523
chr161914064519140695E074-15321
chr161914075919141236E074-14780
chr161914149219141587E074-14429
chr161914172519141775E074-14241
chr161914184219143259E074-12757
chr161914326719143470E074-12546
chr161914370819143959E074-12057
chr161914820419148916E081-7100
chr161914980819150806E081-5210
chr161915084019150997E081-5019
chr161915835619158450E0812340
chr161915857119158730E0812555
chr161915896819159040E0812952
chr161919106619191841E08135050
chr161919188819191938E08135872
chr161915857119158730E0822555










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr161912475219126654E067-29362
chr161917890719180625E06722891
chr161918069419181065E06724678
chr161912475219126654E068-29362
chr161917890719180625E06822891
chr161918069419181065E06824678
chr161912475219126654E069-29362
chr161917890719180625E06922891
chr161918069419181065E06924678
chr161918432819184570E06928312
chr161912475219126654E070-29362
chr161917890719180625E07022891
chr161918069419181065E07024678
chr161917890719180625E07122891
chr161918069419181065E07124678
chr161918432819184570E07128312
chr161918459519184635E07128579
chr161912475219126654E072-29362
chr161917890719180625E07222891
chr161918069419181065E07224678
chr161918432819184570E07228312
chr161918459519184635E07228579
chr161918478019184899E07228764
chr161918495719185007E07228941
chr161918508319185328E07229067
chr161918536119185658E07229345
chr161917890719180625E07322891
chr161918069419181065E07324678
chr161912475219126654E074-29362
chr161917890719180625E07422891
chr161918069419181065E07424678
chr161912475219126654E082-29362
chr161917890719180625E08222891
chr161918069419181065E08224678