| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 18 | NC_000018.10:g.53771958A>G |
| GRCh37.p13 chr 18 | NC_000018.9:g.51298328A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.312 | G=0.688 |
| 1000Genomes | American | Sub | 694 | A=0.090 | G=0.910 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.100 | G=0.900 |
| 1000Genomes | Europe | Sub | 1006 | A=0.115 | G=0.885 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.156 | G=0.844 |
| 1000Genomes | South Asian | Sub | 978 | A=0.090 | G=0.910 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.108 | G=0.892 |
| The Genome Aggregation Database | African | Sub | 8698 | A=0.265 | G=0.735 |
| The Genome Aggregation Database | American | Sub | 832 | A=0.050 | G=0.950 |
| The Genome Aggregation Database | East Asian | Sub | 1618 | A=0.124 | G=0.876 |
| The Genome Aggregation Database | Europe | Sub | 18464 | A=0.115 | G=0.884 |
| The Genome Aggregation Database | Global | Study-wide | 29914 | A=0.156 | G=0.843 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.030 | G=0.970 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.191 | G=0.808 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.112 | G=0.888 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs8091046 | 0.000995 | alcohol dependence | 20201924 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
|---|---|---|---|---|---|---|---|
| There is no eQTL annotation for this SNP | |||||||
| Probe ID | Position | Gene | beta | p-value | |||
|---|---|---|---|---|---|---|---|
| There is no meQTL annotation for this SNP | |||||||
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr18 | 51274257 | 51274404 | E070 | -23924 |
| chr18 | 51325298 | 51325451 | E071 | 26970 |
| chr18 | 51325610 | 51325805 | E071 | 27282 |
| chr18 | 51279280 | 51279480 | E082 | -18848 |
| chr18 | 51279537 | 51279624 | E082 | -18704 |
| chr18 | 51279821 | 51279871 | E082 | -18457 |
| chr18 | 51280072 | 51280255 | E082 | -18073 |