SNP Detail Info-rs849118

Sequence Name	Change(s)
GRCh38.p7 chr 2	NC_000002.12:g.205160450G>A
GRCh37.p13 chr 2	NC_000002.11:g.206025174G>A

Molecule type	Change	Amino acid[Codon]	SO Term
PARD3B transcript variant 1	NM_001302769.1:c.	N/A	Intron Variant
PARD3B transcript variant 3	NM_057177.6:c.	N/A	Intron Variant
PARD3B transcript variant 2	NM_152526.5:c.	N/A	Intron Variant
PARD3B transcript variant 4	NM_205863.3:c.	N/A	Intron Variant
PARD3B transcript variant X1	XM_011510552.2:c.	N/A	Intron Variant
PARD3B transcript variant X13	XM_011510553.2:c.	N/A	Intron Variant
PARD3B transcript variant X2	XM_017003283.1:c.	N/A	Intron Variant
PARD3B transcript variant X3	XM_017003284.1:c.	N/A	Intron Variant
PARD3B transcript variant X4	XM_017003285.1:c.	N/A	Intron Variant
PARD3B transcript variant X5	XM_017003286.1:c.	N/A	Intron Variant
PARD3B transcript variant X6	XM_017003287.1:c.	N/A	Intron Variant
PARD3B transcript variant X7	XM_017003288.1:c.	N/A	Intron Variant
PARD3B transcript variant X8	XM_017003289.1:c.	N/A	Intron Variant
PARD3B transcript variant X9	XM_017003290.1:c.	N/A	Intron Variant
PARD3B transcript variant X10	XM_017003291.1:c.	N/A	Intron Variant
PARD3B transcript variant X11	XM_017003292.1:c.	N/A	Intron Variant
PARD3B transcript variant X12	XM_017003293.1:c.	N/A	Intron Variant
PARD3B transcript variant X14	XM_017003294.1:c.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.823	A=0.177
1000Genomes	American	Sub	694	G=0.980	A=0.020
1000Genomes	East Asian	Sub	1008	G=0.969	A=0.031
1000Genomes	Europe	Sub	1006	G=0.984	A=0.016
1000Genomes	Global	Study-wide	5008	G=0.937	A=0.063
1000Genomes	South Asian	Sub	978	G=0.980	A=0.020
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.992	A=0.008
The Genome Aggregation Database	African	Sub	8718	G=0.842	A=0.158
The Genome Aggregation Database	American	Sub	838	G=0.980	A=0.020
The Genome Aggregation Database	East Asian	Sub	1618	G=0.962	A=0.038
The Genome Aggregation Database	Europe	Sub	18498	G=0.974	A=0.026
The Genome Aggregation Database	Global	Study-wide	29974	G=0.935	A=0.064
The Genome Aggregation Database	Other	Sub	302	G=0.980	A=0.020
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.914	A=0.085
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.992	A=0.008

PMID	Title	Author	Journal
21314694	Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.	Kendler KS	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs849118	0.000532	alcohol dependence	21314694

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr2	206040754	206040849	E068	15580
chr2	206062275	206062428	E068	37101
chr2	206062564	206063220	E068	37390
chr2	206004516	206005151	E070	-20023
chr2	206040754	206040849	E070	15580
chr2	206040982	206041287	E070	15808
chr2	206041396	206041549	E070	16222
chr2	206053103	206053688	E070	27929
chr2	206054151	206054285	E070	28977
chr2	206054287	206054492	E070	29113
chr2	206062275	206062428	E070	37101
chr2	206062564	206063220	E070	37390
chr2	206040754	206040849	E071	15580
chr2	206040982	206041287	E071	15808
chr2	206062564	206063220	E071	37390
chr2	206035176	206035333	E074	10002
chr2	206003353	206003765	E081	-21409
chr2	206004516	206005151	E081	-20023
chr2	206039970	206040035	E081	14796
chr2	206040076	206040126	E081	14902
chr2	206040754	206040849	E081	15580
chr2	206040982	206041287	E081	15808
chr2	206041396	206041549	E081	16222
chr2	206052885	206052945	E081	27711
chr2	206053103	206053688	E081	27929
chr2	206054151	206054285	E081	28977
chr2	206054287	206054492	E081	29113
chr2	206003353	206003765	E082	-21409
chr2	206039970	206040035	E082	14796
chr2	206040076	206040126	E082	14902
chr2	206040754	206040849	E082	15580
chr2	206040982	206041287	E082	15808
chr2	206041396	206041549	E082	16222
chr2	206052885	206052945	E082	27711
chr2	206053103	206053688	E082	27929
chr2	206054151	206054285	E082	28977

rs849118