rs929207

Homo sapiens
C>T
None
Check p-value
SNV (Single Nucleotide Variation)
T=0019 (571/29990,GnomAD)
T=0021 (631/29118,TOPMED)
T=0045 (225/5008,1000G)
T=0002 (7/3854,ALSPAC)
T=0001 (2/3708,TWINSUK)
chr16:31815894 (GRCh38.p7) (16p11.2)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 16NC_000016.10:g.31815894C>T
GRCh37.p13 chr 16NC_000016.9:g.31827215C>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322C=0.969T=0.031
1000GenomesAmericanSub694C=0.980T=0.020
1000GenomesEast AsianSub1008C=0.887T=0.113
1000GenomesEuropeSub1006C=0.998T=0.002
1000GenomesGlobalStudy-wide5008C=0.955T=0.045
1000GenomesSouth AsianSub978C=0.950T=0.050
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854C=0.998T=0.002
The Genome Aggregation DatabaseAfricanSub8730C=0.966T=0.034
The Genome Aggregation DatabaseAmericanSub838C=0.960T=0.040
The Genome Aggregation DatabaseEast AsianSub1622C=0.895T=0.105
The Genome Aggregation DatabaseEuropeSub18498C=0.996T=0.003
The Genome Aggregation DatabaseGlobalStudy-wide29990C=0.981T=0.019
The Genome Aggregation DatabaseOtherSub302C=1.000T=0.000
Trans-Omics for Precision MedicineGlobalStudy-wide29118C=0.978T=0.021
UK 10K study - TwinsTWIN COHORTStudy-wide3708C=0.999T=0.001
PMID Title Author Journal
24277619ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.Quillen EEAm J Med Genet B Neuropsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs9292070.000101alcohol dependence24277619

eQTL of rs929207 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs929207 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.