SNP Detail Info-rs9301944

Organism: Homo sapiens

Alleles: G>A

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A=0147 (4402/29934,GnomAD)
A=0185 (5387/29118,TOPMED)
A=0146 (730/5008,1000G)
A=0106 (410/3854,ALSPAC)
A=0103 (381/3708,TWINSUK)

Position: chr13:87054090 (GRCh38.p7) (13q31.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 13	NC_000013.11:g.87054090G>A
GRCh37.p13 chr 13	NC_000013.10:g.87706345G>A

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	G=0.666	A=0.334
1000Genomes	American	Sub	694	G=0.900	A=0.100
1000Genomes	East Asian	Sub	1008	G=0.970	A=0.030
1000Genomes	Europe	Sub	1006	G=0.906	A=0.094
1000Genomes	Global	Study-wide	5008	G=0.854	A=0.146
1000Genomes	South Asian	Sub	978	G=0.900	A=0.100
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.894	A=0.106
The Genome Aggregation Database	African	Sub	8704	G=0.698	A=0.302
The Genome Aggregation Database	American	Sub	836	G=0.930	A=0.070
The Genome Aggregation Database	East Asian	Sub	1620	G=0.955	A=0.045
The Genome Aggregation Database	Europe	Sub	18472	G=0.913	A=0.086
The Genome Aggregation Database	Global	Study-wide	29934	G=0.852	A=0.147
The Genome Aggregation Database	Other	Sub	302	G=0.840	A=0.160
Trans-Omics for Precision Medicine	Global	Study-wide	29118	G=0.815	A=0.185
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.897	A=0.103

PMID	Title	Author	Journal
23743675	A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.	Kapoor M	Hum Genet

SNP ID	p-value	Traits	Study
rs9301944	0.000114	alcohol consumption	23743675

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs9301944