rs9303345

Homo sapiens
T>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0041 (1239/29942,GnomAD)
A=0061 (1801/29118,TOPMED)
A=0045 (223/5008,1000G)
A=0004 (15/3854,ALSPAC)
A=0006 (24/3708,TWINSUK)
chr17:54079183 (GRCh38.p7) (17q22)
AD
GWASdb2
1   publication(s)
See rs on genome
2 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 17NC_000017.11:g.54079183T>A
GRCh37.p13 chr 17NC_000017.10:g.52156544T>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.841A=0.159
1000GenomesAmericanSub694T=0.990A=0.010
1000GenomesEast AsianSub1008T=1.000A=0.000
1000GenomesEuropeSub1006T=0.997A=0.003
1000GenomesGlobalStudy-wide5008T=0.955A=0.045
1000GenomesSouth AsianSub978T=0.990A=0.010
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.996A=0.004
The Genome Aggregation DatabaseAfricanSub8722T=0.867A=0.133
The Genome Aggregation DatabaseAmericanSub834T=0.990A=0.010
The Genome Aggregation DatabaseEast AsianSub1614T=1.000A=0.000
The Genome Aggregation DatabaseEuropeSub18470T=0.996A=0.003
The Genome Aggregation DatabaseGlobalStudy-wide29942T=0.958A=0.041
The Genome Aggregation DatabaseOtherSub302T=0.990A=0.010
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.938A=0.061
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.994A=0.006
PMID Title Author Journal

P-Value

SNP ID p-value Traits Study
rs93033457.87E-20alcohol consumptionpha001402

eQTL of rs9303345 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9303345 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr175210726652107751E070-48793
chr175210726652107751E081-48793