rs9323560

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0164 (4938/29944,GnomAD)
A=0179 (5237/29118,TOPMED)
A=0201 (1005/5008,1000G)
A=0108 (418/3854,ALSPAC)
A=0094 (350/3708,TWINSUK)
chr14:24803720 (GRCh38.p7) (14q12)
AD
GWASdb2
1   publication(s)
See rs on genome
111 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.24803720G>A
GRCh37.p13 chr 14NC_000014.8:g.25272926G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.746A=0.254
1000GenomesAmericanSub694G=0.920A=0.080
1000GenomesEast AsianSub1008G=0.673A=0.327
1000GenomesEuropeSub1006G=0.890A=0.110
1000GenomesGlobalStudy-wide5008G=0.799A=0.201
1000GenomesSouth AsianSub978G=0.830A=0.170
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.892A=0.108
The Genome Aggregation DatabaseAfricanSub8708G=0.756A=0.244
The Genome Aggregation DatabaseAmericanSub836G=0.890A=0.110
The Genome Aggregation DatabaseEast AsianSub1614G=0.695A=0.305
The Genome Aggregation DatabaseEuropeSub18486G=0.880A=0.119
The Genome Aggregation DatabaseGlobalStudy-wide29944G=0.835A=0.164
The Genome Aggregation DatabaseOtherSub300G=0.910A=0.090
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.820A=0.179
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.906A=0.094
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs93235600.000354alcohol dependence21314694

eQTL of rs9323560 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9323560 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr142527944525280395E0676519
chr142528485825286112E06711932
chr142528618625288064E06713260
chr142530797025308187E06735044
chr142530820925308584E06735283
chr142530883125309293E06735905
chr142531488125315669E06741955
chr142527524625275956E0682320
chr142527597025276022E0683044
chr142527603625276196E0683110
chr142527944525280395E0686519
chr142530627325306326E06833347
chr142530640925306462E06833483
chr142530670225306809E06833776
chr142530797025308187E06835044
chr142530820925308584E06835283
chr142530947725309657E06836551
chr142530966025309963E06836734
chr142531488125315669E06841955
chr142531575525315795E06842829
chr142531665525316705E06843729
chr142531675125316835E06843825
chr142531696525317735E06844039
chr142531777625317943E06844850
chr142531802925318187E06845103
chr142531863725318681E06845711
chr142531870525318988E06845779
chr142531913325319183E06846207
chr142531942625319528E06846500
chr142531958325319718E06846657
chr142532142225321511E06848496
chr142527929025279422E0696364
chr142527944525280395E0696519
chr142528051025280609E0697584
chr142528618625288064E06913260
chr142528829025288496E06915364
chr142530640925306462E06933483
chr142530670225306809E06933776
chr142530698825307115E06934062
chr142530714225307184E06934216
chr142530883125309293E06935905
chr142530947725309657E06936551
chr142530966025309963E06936734
chr142531488125315669E06941955
chr142531575525315795E06942829
chr142525830625259271E070-13655
chr142527944525280395E0706519
chr142528051025280609E0707584
chr142525437325254465E071-18461
chr142527524625275956E0712320
chr142527944525280395E0716519
chr142528485825286112E07111932
chr142528618625288064E07113260
chr142530714225307184E07134216
chr142530820925308584E07135283
chr142530883125309293E07135905
chr142530947725309657E07136551
chr142530966025309963E07136734
chr142531488125315669E07141955
chr142531575525315795E07142829
chr142528618625288064E07213260
chr142528829025288496E07215364
chr142530670225306809E07233776
chr142530698825307115E07234062
chr142530714225307184E07234216
chr142530820925308584E07235283
chr142530883125309293E07235905
chr142530947725309657E07236551
chr142530966025309963E07236734
chr142531488125315669E07241955
chr142531575525315795E07242829
chr142531802925318187E07245103
chr142531913325319183E07246207
chr142531942625319528E07246500
chr142531958325319718E07246657
chr142531978425319855E07246858
chr142531996925320013E07247043
chr142527929025279422E0736364
chr142528618625288064E07313260
chr142530524025305372E07332314
chr142530947725309657E07336551
chr142530966025309963E07336734
chr142531942625319528E07346500
chr142531958325319718E07346657
chr142531978425319855E07346858
chr142527524625275956E0742320
chr142527597025276022E0743044
chr142527929025279422E0746364
chr142527944525280395E0746519
chr142528618625288064E07413260
chr142528829025288496E07415364
chr142528900025289078E07416074
chr142530797025308187E07435044
chr142530820925308584E07435283
chr142530883125309293E07435905
chr142530947725309657E07436551
chr142531488125315669E07441955
chr142531575525315795E07442829
chr142526374425264197E081-8729
chr142526447425264524E081-8402
chr142527929025279422E0816364
chr142527944525280395E0816519
chr142530797025308187E08135044
chr142530820925308584E08135283
chr142531675125316835E08143825
chr142531696525317735E08144039
chr142531777625317943E08144850
chr142527603625276196E0823110
chr142528214425282222E0829218
chr142530820925308584E08235283
chr142530883125309293E08235905