rs9327332

Homo sapiens
A>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0149 (4475/29962,GnomAD)
C=0147 (4288/29118,TOPMED)
C=0109 (546/5008,1000G)
C=0175 (676/3854,ALSPAC)
C=0190 (705/3708,TWINSUK)
chr5:124553888 (GRCh38.p7) (5q23.2)
AD
GWASdb2
1   publication(s)
See rs on genome
232 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 5NC_000005.10:g.124553888A>C
GRCh37.p13 chr 5NC_000005.9:g.123889581A>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.859C=0.141
1000GenomesAmericanSub694A=0.890C=0.110
1000GenomesEast AsianSub1008A=0.963C=0.037
1000GenomesEuropeSub1006A=0.842C=0.158
1000GenomesGlobalStudy-wide5008A=0.891C=0.109
1000GenomesSouth AsianSub978A=0.910C=0.090
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.825C=0.175
The Genome Aggregation DatabaseAfricanSub8718A=0.856C=0.144
The Genome Aggregation DatabaseAmericanSub836A=0.900C=0.100
The Genome Aggregation DatabaseEast AsianSub1618A=0.949C=0.051
The Genome Aggregation DatabaseEuropeSub18488A=0.837C=0.162
The Genome Aggregation DatabaseGlobalStudy-wide29962A=0.850C=0.149
The Genome Aggregation DatabaseOtherSub302A=0.830C=0.170
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.852C=0.147
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.810C=0.190
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs93273320.00014alcohol dependence20201924

eQTL of rs9327332 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9327332 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr5123848072123848190E067-41391
chr5123855048123855533E067-34048
chr5123855611123855661E067-33920
chr5123855753123855830E067-33751
chr5123862912123863682E067-25899
chr5123867862123868042E067-21539
chr5123885982123886133E067-3448
chr5123886383123886483E067-3098
chr5123886602123886833E067-2748
chr5123886972123887016E067-2565
chr5123887428123887547E067-2034
chr5123887611123887682E067-1899
chr5123887736123887880E067-1701
chr5123889848123889902E067267
chr5123890100123890899E067519
chr5123890947123891192E0671366
chr5123908813123908924E06719232
chr5123909018123909194E06719437
chr5123909962123910017E06720381
chr5123910080123910219E06720499
chr5123910281123910672E06720700
chr5123910869123910944E06721288
chr5123911979123912029E06722398
chr5123912692123912965E06723111
chr5123916553123918018E06726972
chr5123927317123927610E06737736
chr5123928742123928874E06739161
chr5123928932123929091E06739351
chr5123932438123932985E06742857
chr5123934808123935716E06745227
chr5123935757123936039E06746176
chr5123848072123848190E068-41391
chr5123848573123848666E068-40915
chr5123848705123848797E068-40784
chr5123862912123863682E068-25899
chr5123867862123868042E068-21539
chr5123872115123873445E068-16136
chr5123886383123886483E068-3098
chr5123887428123887547E068-2034
chr5123890947123891192E0681366
chr5123906102123906265E06816521
chr5123906297123906341E06816716
chr5123906394123906499E06816813
chr5123906503123906621E06816922
chr5123910869123910944E06821288
chr5123911979123912029E06822398
chr5123912692123912965E06823111
chr5123912989123913029E06823408
chr5123916553123918018E06826972
chr5123927317123927610E06837736
chr5123928742123928874E06839161
chr5123928932123929091E06839351
chr5123932438123932985E06842857
chr5123934808123935716E06845227
chr5123847537123847746E069-41835
chr5123848072123848190E069-41391
chr5123848573123848666E069-40915
chr5123848705123848797E069-40784
chr5123885850123885938E069-3643
chr5123885982123886133E069-3448
chr5123886383123886483E069-3098
chr5123886602123886833E069-2748
chr5123886972123887016E069-2565
chr5123887428123887547E069-2034
chr5123887611123887682E069-1899
chr5123887736123887880E069-1701
chr5123890100123890899E069519
chr5123890947123891192E0691366
chr5123909018123909194E06919437
chr5123909287123909777E06919706
chr5123909962123910017E06920381
chr5123910080123910219E06920499
chr5123910281123910672E06920700
chr5123910869123910944E06921288
chr5123911979123912029E06922398
chr5123912692123912965E06923111
chr5123912989123913029E06923408
chr5123916553123918018E06926972
chr5123927317123927610E06937736
chr5123928742123928874E06939161
chr5123928932123929091E06939351
chr5123932438123932985E06942857
chr5123934808123935716E06945227
chr5123935757123936039E06946176
chr5123848961123849168E070-40413
chr5123850867123851037E070-38544
chr5123851251123851512E070-38069
chr5123851556123852184E070-37397
chr5123885850123885938E070-3643
chr5123885982123886133E070-3448
chr5123886383123886483E070-3098
chr5123886602123886833E070-2748
chr5123886972123887016E070-2565
chr5123890100123890899E070519
chr5123890947123891192E0701366
chr5123909287123909777E07019706
chr5123909962123910017E07020381
chr5123910080123910219E07020499
chr5123910281123910672E07020700
chr5123910869123910944E07021288
chr5123911979123912029E07022398
chr5123916328123916531E07026747
chr5123916553123918018E07026972
chr5123934808123935716E07045227
chr5123935757123936039E07046176
chr5123847537123847746E071-41835
chr5123850867123851037E071-38544
chr5123851251123851512E071-38069
chr5123867862123868042E071-21539
chr5123885850123885938E071-3643
chr5123885982123886133E071-3448
chr5123886383123886483E071-3098
chr5123886602123886833E071-2748
chr5123886972123887016E071-2565
chr5123887428123887547E071-2034
chr5123887611123887682E071-1899
chr5123887736123887880E071-1701
chr5123906102123906265E07116521
chr5123906297123906341E07116716
chr5123906394123906499E07116813
chr5123906503123906621E07116922
chr5123909287123909777E07119706
chr5123909962123910017E07120381
chr5123910080123910219E07120499
chr5123910281123910672E07120700
chr5123910869123910944E07121288
chr5123911979123912029E07122398
chr5123912692123912965E07123111
chr5123912989123913029E07123408
chr5123916328123916531E07126747
chr5123916553123918018E07126972
chr5123928742123928874E07139161
chr5123928932123929091E07139351
chr5123932438123932985E07142857
chr5123934808123935716E07145227
chr5123935757123936039E07146176
chr5123848072123848190E072-41391
chr5123848573123848666E072-40915
chr5123848705123848797E072-40784
chr5123848961123849168E072-40413
chr5123867862123868042E072-21539
chr5123886602123886833E072-2748
chr5123886972123887016E072-2565
chr5123887428123887547E072-2034
chr5123887611123887682E072-1899
chr5123887736123887880E072-1701
chr5123890947123891192E0721366
chr5123906102123906265E07216521
chr5123906297123906341E07216716
chr5123906394123906499E07216813
chr5123906503123906621E07216922
chr5123908813123908924E07219232
chr5123909018123909194E07219437
chr5123909962123910017E07220381
chr5123910080123910219E07220499
chr5123910281123910672E07220700
chr5123910869123910944E07221288
chr5123911979123912029E07222398
chr5123912692123912965E07223111
chr5123912989123913029E07223408
chr5123916553123918018E07226972
chr5123928742123928874E07239161
chr5123928932123929091E07239351
chr5123932438123932985E07242857
chr5123934808123935716E07245227
chr5123890947123891192E0731366
chr5123909287123909777E07319706
chr5123909962123910017E07320381
chr5123910080123910219E07320499
chr5123916553123918018E07326972
chr5123928742123928874E07339161
chr5123928932123929091E07339351
chr5123932438123932985E07342857
chr5123934808123935716E07345227
chr5123847537123847746E074-41835
chr5123848072123848190E074-41391
chr5123848573123848666E074-40915
chr5123848705123848797E074-40784
chr5123860048123860201E074-29380
chr5123860394123860518E074-29063
chr5123867862123868042E074-21539
chr5123885982123886133E074-3448
chr5123886383123886483E074-3098
chr5123886602123886833E074-2748
chr5123886972123887016E074-2565
chr5123887428123887547E074-2034
chr5123887611123887682E074-1899
chr5123887736123887880E074-1701
chr5123889848123889902E074267
chr5123890100123890899E074519
chr5123890947123891192E0741366
chr5123898663123898800E0749082
chr5123906394123906499E07416813
chr5123906503123906621E07416922
chr5123908813123908924E07419232
chr5123909018123909194E07419437
chr5123909287123909777E07419706
chr5123910869123910944E07421288
chr5123911979123912029E07422398
chr5123912692123912965E07423111
chr5123912989123913029E07423408
chr5123916328123916531E07426747
chr5123916553123918018E07426972
chr5123928742123928874E07439161
chr5123928932123929091E07439351
chr5123932438123932985E07442857
chr5123934808123935716E07445227
chr5123935757123936039E07446176
chr5123847537123847746E081-41835
chr5123848072123848190E081-41391
chr5123908813123908924E08119232
chr5123909018123909194E08119437
chr5123909287123909777E08119706
chr5123909962123910017E08120381
chr5123910080123910219E08120499
chr5123910281123910672E08120700
chr5123910869123910944E08121288
chr5123916553123918018E08126972
chr5123918089123918194E08128508
chr5123918319123918502E08128738
chr5123918876123918966E08129295
chr5123934808123935716E08145227
chr5123850867123851037E082-38544
chr5123906297123906341E08216716
chr5123908813123908924E08219232
chr5123909018123909194E08219437
chr5123909962123910017E08220381
chr5123910080123910219E08220499
chr5123910281123910672E08220700
chr5123916553123918018E08226972
chr5123918089123918194E08228508
chr5123918319123918502E08228738