rs9350195

Homo sapiens
T>A / T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0157 (4727/29956,GnomAD)
T==0169 (4933/29118,TOPMED)
T==0114 (569/5008,1000G)
T==0203 (781/3854,ALSPAC)
T==0201 (746/3708,TWINSUK)
chr6:19899174 (GRCh38.p7) (6p22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
9 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 6NC_000006.12:g.19899174T>A
GRCh38.p7 chr 6NC_000006.12:g.19899174T>C
GRCh37.p13 chr 6NC_000006.11:g.19899405T>A
GRCh37.p13 chr 6NC_000006.11:g.19899405T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.138C=0.862
1000GenomesAmericanSub694T=0.120C=0.880
1000GenomesEast AsianSub1008T=0.005C=0.995
1000GenomesEuropeSub1006T=0.194C=0.806
1000GenomesGlobalStudy-wide5008T=0.114C=0.886
1000GenomesSouth AsianSub978T=0.100C=0.900
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.203C=0.797
The Genome Aggregation DatabaseAfricanSub8714T=0.152C=0.848
The Genome Aggregation DatabaseAmericanSub838T=0.140C=0.86,
The Genome Aggregation DatabaseEast AsianSub1622T=0.002C=0.996
The Genome Aggregation DatabaseEuropeSub18480T=0.174C=0.826
The Genome Aggregation DatabaseGlobalStudy-wide29956T=0.157C=0.842
The Genome Aggregation DatabaseOtherSub302T=0.220C=0.78,
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.169C=0.830
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.201C=0.799
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs93501950.000725alcohol dependence21314694

eQTL of rs9350195 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9350195 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr64130011041300182E070-6826
chr64130033041300573E070-6435
chr64130325841303353E070-3655
chr64130340241303512E070-3496
chr64130366741303713E070-3295
chr64130386541303926E070-3082
chr64130397241304056E070-2952
chr64130408541304135E070-2873
chr64130467741304844E070-2164