rs9351629

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0394 (11781/29868,GnomAD)
A=0375 (10925/29118,TOPMED)
A=0449 (2251/5008,1000G)
A=0432 (1664/3854,ALSPAC)
A=0437 (1619/3708,TWINSUK)
chr6:67093319 (GRCh38.p7) (6q12)
AD
GWASdb2
1   publication(s)
See rs on genome
0 Enhancer around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 6NC_000006.12:g.67093319G>A
GRCh37.p13 chr 6NC_000006.11:g.67803212G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.777A=0.223
1000GenomesAmericanSub694G=0.570A=0.430
1000GenomesEast AsianSub1008G=0.407A=0.593
1000GenomesEuropeSub1006G=0.562A=0.438
1000GenomesGlobalStudy-wide5008G=0.551A=0.449
1000GenomesSouth AsianSub978G=0.370A=0.630
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.568A=0.432
The Genome Aggregation DatabaseAfricanSub8698G=0.762A=0.238
The Genome Aggregation DatabaseAmericanSub834G=0.500A=0.500
The Genome Aggregation DatabaseEast AsianSub1604G=0.403A=0.597
The Genome Aggregation DatabaseEuropeSub18430G=0.554A=0.445
The Genome Aggregation DatabaseGlobalStudy-wide29868G=0.605A=0.394
The Genome Aggregation DatabaseOtherSub302G=0.600A=0.400
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.624A=0.375
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.563A=0.437
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs93516290.0000608alcoholismpha002892
rs93516290.000061alcohol dependence20201924

eQTL of rs9351629 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9351629 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.