rs9371951

Homo sapiens
T>C
LOC101928923 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
C=0462 (13840/29912,GnomAD)
C=0494 (14397/29118,TOPMED)
C=0469 (2349/5008,1000G)
C=0442 (1705/3854,ALSPAC)
C=0439 (1627/3708,TWINSUK)
chr6:155993786 (GRCh38.p7) (6q25.3)
AD
GWASdb2
1   publication(s)
See rs on genome
35 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 6NC_000006.12:g.155993786T>C
GRCh37.p13 chr 6NC_000006.11:g.156314920T>C

Gene: LOC101928923, uncharacterized LOC101928923(minus strand)

Molecule type Change Amino acid[Codon] SO Term
LOC101928923 transcriptXR_001744423.1:n.N/AIntron Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.387C=0.613
1000GenomesAmericanSub694T=0.570C=0.430
1000GenomesEast AsianSub1008T=0.604C=0.396
1000GenomesEuropeSub1006T=0.531C=0.469
1000GenomesGlobalStudy-wide5008T=0.531C=0.469
1000GenomesSouth AsianSub978T=0.620C=0.380
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.558C=0.442
The Genome Aggregation DatabaseAfricanSub8710T=0.418C=0.582
The Genome Aggregation DatabaseAmericanSub832T=0.520C=0.480
The Genome Aggregation DatabaseEast AsianSub1608T=0.581C=0.419
The Genome Aggregation DatabaseEuropeSub18460T=0.590C=0.410
The Genome Aggregation DatabaseGlobalStudy-wide29912T=0.537C=0.462
The Genome Aggregation DatabaseOtherSub302T=0.580C=0.420
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.505C=0.494
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.561C=0.439
PMID Title Author Journal
24277619ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.Quillen EEAm J Med Genet B Neuropsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs93719514.3E-05alcohol consumption (maxi-drinks)24277619

eQTL of rs9371951 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9371951 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr6156296440156296829E068-18091
chr6156307533156307618E069-7302
chr6156289937156290000E070-24920
chr6156290073156290190E070-24730
chr6156290216156290358E070-24562
chr6156306232156306286E070-8634
chr6156306305156306529E070-8391
chr6156306543156306686E070-8234
chr6156306735156307433E070-7487
chr6156313897156314207E070-713
chr6156314295156314360E070-560
chr6156314372156314477E070-443
chr6156314480156314873E070-47
chr6156334769156334819E07019849
chr6156334930156335000E07020010
chr6156348949156349098E07034029
chr6156305196156305246E081-9674
chr6156306232156306286E081-8634
chr6156306305156306529E081-8391
chr6156306543156306686E081-8234
chr6156306735156307433E081-7487
chr6156307533156307618E081-7302
chr6156307747156307874E081-7046
chr6156313737156313846E081-1074
chr6156313897156314207E081-713
chr6156314295156314360E081-560
chr6156314372156314477E081-443
chr6156314480156314873E081-47
chr6156349272156349328E08134352
chr6156306232156306286E082-8634
chr6156306305156306529E082-8391
chr6156306543156306686E082-8234
chr6156306735156307433E082-7487
chr6156307533156307618E082-7302
chr6156307747156307874E082-7046