rs9372532

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0154 (4624/29928,GnomAD)
C=0167 (4878/29118,TOPMED)
C=0211 (1056/5008,1000G)
C=0094 (361/3854,ALSPAC)
C=0097 (360/3708,TWINSUK)
chr6:119408545 (GRCh38.p7) (6q22.31)
AD
GWASdb2
1   publication(s)
See rs on genome
32 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 6NC_000006.12:g.119408545T>C
GRCh37.p13 chr 6NC_000006.11:g.119729710T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.759C=0.241
1000GenomesAmericanSub694T=0.700C=0.300
1000GenomesEast AsianSub1008T=0.699C=0.301
1000GenomesEuropeSub1006T=0.890C=0.110
1000GenomesGlobalStudy-wide5008T=0.789C=0.211
1000GenomesSouth AsianSub978T=0.880C=0.120
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.906C=0.094
The Genome Aggregation DatabaseAfricanSub8716T=0.789C=0.211
The Genome Aggregation DatabaseAmericanSub834T=0.690C=0.310
The Genome Aggregation DatabaseEast AsianSub1600T=0.704C=0.296
The Genome Aggregation DatabaseEuropeSub18476T=0.890C=0.109
The Genome Aggregation DatabaseGlobalStudy-wide29928T=0.845C=0.154
The Genome Aggregation DatabaseOtherSub302T=0.900C=0.100
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.832C=0.167
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.903C=0.097
PMID Title Author Journal
24277619ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.Quillen EEAm J Med Genet B Neuropsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs93725320.000532alcohol consumption (maxi-drinks)24277619

eQTL of rs9372532 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs9372532 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr6119766958119767060E06737248
chr6119767242119767647E06737532
chr6119767697119767855E06737987
chr6119767884119768180E06738174
chr6119774531119774913E06744821
chr6119766958119767060E06837248
chr6119767242119767647E06837532
chr6119767697119767855E06837987
chr6119767884119768180E06838174
chr6119768694119768927E06838984
chr6119766958119767060E06937248
chr6119767242119767647E06937532
chr6119767697119767855E06937987
chr6119767884119768180E06938174
chr6119774531119774913E06944821
chr6119766245119766498E07136535
chr6119766958119767060E07137248
chr6119767242119767647E07137532
chr6119767697119767855E07137987
chr6119767884119768180E07138174
chr6119767242119767647E07237532
chr6119767697119767855E07237987
chr6119767884119768180E07238174
chr6119775976119776248E07246266
chr6119766958119767060E07337248
chr6119767242119767647E07337532
chr6119767697119767855E07337987
chr6119766958119767060E07437248
chr6119767242119767647E07437532
chr6119767697119767855E07437987
chr6119767884119768180E07438174
chr6119774531119774913E08144821