rs941612

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0169 (5076/29962,GnomAD)
G=0147 (4281/29118,TOPMED)
G=0321 (1606/5008,1000G)
G=0148 (569/3854,ALSPAC)
G=0134 (498/3708,TWINSUK)
chr14:52154950 (GRCh38.p7) (14q22.1)
AD
GWASdb2
1   publication(s)
See rs on genome
38 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.52154950A>G
GRCh37.p13 chr 14NC_000014.8:g.52621668A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.909G=0.091
1000GenomesAmericanSub694A=0.580G=0.420
1000GenomesEast AsianSub1008A=0.331G=0.669
1000GenomesEuropeSub1006A=0.860G=0.140
1000GenomesGlobalStudy-wide5008A=0.679G=0.321
1000GenomesSouth AsianSub978A=0.610G=0.390
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.852G=0.148
The Genome Aggregation DatabaseAfricanSub8712A=0.895G=0.105
The Genome Aggregation DatabaseAmericanSub838A=0.560G=0.440
The Genome Aggregation DatabaseEast AsianSub1612A=0.347G=0.653
The Genome Aggregation DatabaseEuropeSub18498A=0.854G=0.145
The Genome Aggregation DatabaseGlobalStudy-wide29962A=0.830G=0.169
The Genome Aggregation DatabaseOtherSub302A=0.850G=0.150
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.853G=0.147
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.866G=0.134
PMID Title Author Journal
21529783A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.Heath ACBiol Psychiatry

P-Value

SNP ID p-value Traits Study
rs9416127.4E-05alcoholism (heaviness of drinking)21529783

eQTL of rs941612 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs941612 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr145258352352583573E067-38095
chr145258368352583811E067-37857
chr145258394452584637E067-37031
chr145258551552585615E067-36053
chr145258577752586267E067-35401
chr145258352352583573E068-38095
chr145258551552585615E068-36053
chr145258577752586267E068-35401
chr145259810252598930E068-22738
chr145258352352583573E069-38095
chr145258368352583811E069-37857
chr145258394452584637E069-37031
chr145258480952584853E069-36815
chr145258486952584960E069-36708
chr145258551552585615E069-36053
chr145258577752586267E069-35401
chr145258297352583031E071-38637
chr145258352352583573E071-38095
chr145258368352583811E071-37857
chr145258394452584637E071-37031
chr145258480952584853E071-36815
chr145258486952584960E071-36708
chr145258551552585615E071-36053
chr145258352352583573E072-38095
chr145258368352583811E072-37857
chr145258394452584637E072-37031
chr145258551552585615E072-36053
chr145258577752586267E072-35401
chr145259810252598930E072-22738
chr145258297352583031E074-38637
chr145258352352583573E074-38095
chr145258368352583811E074-37857
chr145258394452584637E074-37031
chr145258480952584853E074-36815
chr145258486952584960E074-36708
chr145258551552585615E074-36053
chr145258577752586267E074-35401
chr145265819052658240E07436522